Anomalospiza imberbis (cuckoo-finch): 137480193
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Entry
137480193 CDS
T11605
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04136
Autophagy - other
aib04140
Autophagy - animal
aib04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137480193 (ATG4B)
04140 Autophagy - animal
137480193 (ATG4B)
04136 Autophagy - other
137480193 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aib01002
]
137480193 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137480193 (ATG4B)
03029 Mitochondrial biogenesis [BR:
aib03029
]
137480193 (ATG4B)
Peptidases and inhibitors [BR:
aib01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
137480193 (ATG4B)
Membrane trafficking [BR:
aib04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
137480193 (ATG4B)
Mitochondrial biogenesis [BR:
aib03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
137480193 (ATG4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
137480193
NCBI-ProteinID:
XP_068057294
LinkDB
All DBs
Position
10:complement(21726698..21745268)
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFEYEDFPETKEPVWILGRKYSVFTEKDEILLDVTSRLWFTYRKNFPAI
GGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWIKGKRQLDNYFNVLNAFIDKKDS
YYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAAFDTWSSLAVHIAMDNTVVMEEIRR
LCQSNGPCAGAAACPALESDVLYNGCPEDVGLRERLALWKPLVLLIPLRLGLTEINEAYI
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPGDSGCLPDESFH
CQHPPCRMSIAELDPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVEHQPSHFS
NPDVLNLTPDSSDADRLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactcttacctacgacaccctcaggtttgagtatgaagacttccctgag
accaaagaacccgtttggatccttggccggaaatacagtgtttttacagagaaggacgag
atcctgttggatgtgacctctcggctttggttcacctacagaaagaacttccctgctatt
ggaggaaccggtcccacctctgacacgggctggggctgcatgctgcgctgtggccagatg
atctttgctcaggccttggtctgcaggcatttgggaagagactggaggtggataaaaggg
aagaggcagctggataattacttcaatgttcttaatgccttcattgacaaaaaagacagc
tactactccattcaccagatagcccagatgggagtcggggagggaaaatccataggccag
tggtatggaccaaacacggttgcacaggtgctcaaaaaacttgcagcttttgatacatgg
agttccctggcagtacacatagccatggacaacacagtggtgatggaagaaatccggagg
ctgtgccagtccaatgggccatgtgctggagctgcagcatgccctgccctggagtcagat
gtgctctacaatggctgcccagaggacgtggggctcagagagaggctcgccctgtggaaa
ccactggtgctgctgatacctctccgcctcgggctcacagagatcaatgaagcctatatt
gaaacactaaagcactgcttcatgatgccccagtccctgggagtgatcggcgggaagcca
aacagtgctcactacttcattggctatgtaggtgaggagctcatttacctggacccccac
accacgcagccggcggtggagcccggtgacagcggctgcctccccgacgagagcttccac
tgccagcaccctccgtgcaggatgagcatcgccgagctcgacccctccattgccgtgggc
tttttctgcaacacagaggcagactttaatgactggtgtcagcaaatcaaaaagctgtcc
ctggtcagaggagcgctgcccatgttcgagctggtggaacaccagccctcacacttctcc
aaccccgacgtcctgaatctcacaccagactcctctgatgccgacagattggaaaggttc
tttgactcagaagatgaagactttgaaatcctgtccctttga
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