KEGG   Anomalospiza imberbis (cuckoo-finch): 137480902
Entry
137480902         CDS       T11605                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03013  Nucleocytoplasmic transport
aib04141  Protein processing in endoplasmic reticulum
aib04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:aib00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137480902 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    137480902 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    137480902 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aib03019]
    137480902 (SEC13)
   04131 Membrane trafficking [BR:aib04131]
    137480902 (SEC13)
Messenger RNA biogenesis [BR:aib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     137480902 (SEC13)
Membrane trafficking [BR:aib04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    137480902 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    137480902 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    137480902 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR41 Beta-prop_WDR35_TULP_N WD40_RFWD3 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 137480902
NCBI-ProteinID: XP_068058472
LinkDB
Position
11:complement(22753078..22759464)
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTYEYTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLSYTGDGQWEVKKISNAHTIGCNAVSWAPAVVPGSLIEQPSGQKPNYIK
RFASGGCDNLVKIWKEEEGQWKEEQKLEAHSDWVRDVAWAPSIGLPSSTIASCSQDGRVF
IWTCDDASGNSWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGLWACIS
DVNKGQGGVSAVTEGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtgtcggtcattaacaccgtggacacgtcccacgaggacatgatccacgatgcacag
atggattactacggcacgcgcctggcaacctgctcctcagaccgatccgtgaagatcttc
gatgtccgcaacggggggcagatcctcattgcagacctgagggggcacgaaggtcccgtg
tggcaggttgcctgggctcatcctatgtatgggaatatcttggcttcctgttcctatgac
aggaaggttattatctggaaggaagaaaatggcacttgggaaaagacctacgagtacacg
ggacacgattcttcagtgaattctgtctgctgggcaccacacgactatggactgatcctg
gcctgtgggagctctgacggggccatttccttgttgagctacacgggtgatgggcagtgg
gaagtcaaaaagatcagcaatgcacacacgattggatgtaatgcagttagctgggctcct
gctgttgtaccaggaagccttatagaacagccctctggtcaaaagccgaactacatcaaa
aggtttgcatctggtggctgtgacaacctggtcaagatctggaaggaagaagagggtcag
tggaaagaagagcagaagctggaggctcacagtgactgggtacgagacgtggcctgggct
ccatccataggtttgccatccagcaccattgctagctgctcacaggatggccgagtgttt
atctggacgtgtgatgatgcctctggaaactcctggtcgccaaagctgctgcacaagttc
aatgatgttgtctggcacgtgagctggtccatcactgccaacatccttgcagtgtctgga
ggagacaacaaagtgacactgtggaaggagtcagtggacggactgtgggcgtgtatcagc
gacgtgaacaagggccaaggaggggtgtctgctgtgacagaagggcagcagaatgagcag
tga

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