Anomalospiza imberbis (cuckoo-finch): 137481954
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Entry
137481954 CDS
T11605
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
137481954 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137481954 (MYO5C)
04131 Membrane trafficking [BR:
aib04131
]
137481954 (MYO5C)
03029 Mitochondrial biogenesis [BR:
aib03029
]
137481954 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aib04812
]
137481954 (MYO5C)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
137481954 (MYO5C)
mRNA cycle factors
P-body specific factors
137481954 (MYO5C)
Membrane trafficking [BR:
aib04131
]
Others
Actin-binding proteins
Myosins
137481954 (MYO5C)
Mitochondrial biogenesis [BR:
aib03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
137481954 (MYO5C)
Cytoskeleton proteins [BR:
aib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
137481954 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Par-4_C
AAA_22
Myosin_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
137481954
NCBI-ProteinID:
XP_068060059
LinkDB
All DBs
Position
13:complement(12129741..12164100)
Genome browser
AA seq
1784 aa
AA seq
DB search
MHSELLIFVIFRACHRNSFAALCREVINVSVGFLRWVRTAPWGPSGSRSVHHSRSLKYNR
VWIPNNEEVWQSAEITKNYKAGDRFLHVQLEDGTELSYPVDPAALPPLRNPDILVGENDL
TALSYLHEPAVLHNLKIRFVESKLIYTYSGIILVAINPYKQLPIYGDAIIHAYSGQNMGD
MDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFATVSKSSSNAHVED
KVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYQIIGANMRTYLLEKSRVVFQSE
NERNYHIFYQLCASAMQPEYEHLKLGSAEEFNYTRMGGSTVIEGVDDRANMVETQKTFAL
LGLKGDFQMDVFKMLAAILHLGNVEVAAVGDERSSISMEDKHLRIFCELLDLNCDKMARW
LCHRKIVTTSETVVKPMTRAQAVNARDALAKKIYSHLFDFIVERINQALQFPGKQHTFIG
VLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQP
VIDLIEAKMGILELLDEECLLPHGKDENWLQKLYNNFVNKNALFEKPRMSNTSFIIQHFA
DKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDSPVSVSPFSSTINIKSARPV
LKSPNKQLRTTVGSKFRNSLSLLMATLNATTPHYVRCIKPNDEKLPFEFDSKRVAQQLRA
CGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSINDKKQICKIVLQRLIQDHNQYQ
FGRTKIFFRAGQVAYLEKLRSDKLRQACILLQKRVRGWLQRRRFLAMRRAALTVQQYFRG
QRTVRQAITARNLKQTWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAYTRGFLARKKYRK
MREEQKAVVLQKYARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKIEEQSRENHGLLERL
TNLASAHMNDMDTIQKLESELEKLTAQKRTYEEKGKKYKEDSEQKILKLENQNKELQEQK
ETLEIKLQEKNEEMKEKMDDLTQQLFNDVQKEENQRMILEKNFQNQKQDYEKEIELLKGE
IKLLKEEKTQLQQQIQQEIIIQDGLKMEVGQLTQQAQKIPELQKEIELLQTQKLDVEKQA
HSQKRELREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFAYEGLKKATRVLE
SHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLEVSRLTSENLVIP
DLKQQVAELENQKLDLENRLQEQTIKLKEMSNRLHYELERDRTQRRTTEAQNEVDIKEKE
SLKDTIQGIEGLSNGLMQDEVQGELQSKIKQVTTRLAVENMDLEEKLDMKDRIIRKLEDQ
IKTLTKTIEKSEAHVPTVPKEYIGMMEYKKEDEERIIQNLILDLKPRGVVVNMIPGLPAH
ILFMCVRYADYLNDADMLKSFMNVTIDGIKQVVKEHSEDFEMLSFWLSNTYYFLNCLKQY
SGEEEFMKYNTPRQNKNCLKHFDLSEYRQILSDLAIQLYHQFIIVMENNIQHMIVPGMLE
YESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTMCQNGLDSELLKQAVKQ
LFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQSSNAKETLEPLSQAA
WLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKRVTPSFVRKVQAMLNNR
EDVPQLMLDTKHLFQVTFPFTPSPHALELIQVPSSFKLGFLTRV
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgcactcagagttgttaatttttgtcatattcagagcttgtcatagaaattcctttgca
gcactttgtagggaggtgattaatgtttctgttggttttctccgctgggtcaggactgct
ccctggggaccctctggcagccgcagtgtccatcattcccgctccctaaagtacaatagg
gtttggatccccaataatgaagaagtttggcagtctgcagaaatcacaaaaaactacaaa
gctggagaccgttttcttcatgtgcaattagaagatggaactgagctgagttaccctgtt
gatccagctgctttgccaccactacgaaatcctgacatacttgttggtgaaaatgatctc
actgcactcagttatctgcatgaaccagctgttctacacaatcttaaaattcgttttgtg
gagtctaagcttatctacacatatagtgggataattctggttgcaataaacccctataag
cagctgccaatatatggagatgccattatccatgcatatagtgggcaaaacatgggggac
atggatccacatatatttgctgtggcagaagaagcatacaagcaaatggcaagaaataac
aaaaatcagtctattatagtcagtggagaatcaggagctggaaagactgtgtctgcaagg
tatactatgagatactttgccactgtgagtaagtccagcagcaatgcacatgtggaggat
aaagtactggcatccaatccaataaccgaggctgtgggaaatgcaaaaaccacacggaat
gataacagcagtcgatttggaaaatacactgaaatcagttttgatcagagttaccaaatc
attggagctaacatgagaacatacctgcttgagaaatccagagttgtatttcagtcagaa
aatgaaaggaactaccatatattttatcagttgtgtgcatctgctatgcagcctgaatat
gaacatcttaaattgggaagtgcagaagaatttaactacacacgaatgggtggcagcact
gtaatagaaggggttgatgacagagcaaatatggtggagactcagaagacttttgcctta
ctgggtctgaagggggattttcagatggatgtttttaaaatgctggcagcaatcctgcac
ttgggcaatgtggaagtagcagctgttggagatgaaagatcatccatcagtatggaagat
aaacatctcagaatattctgtgagcttctggatttaaactgtgacaaaatggcccggtgg
ctgtgccaccgaaagattgtcaccacctcagagaccgtggtaaagccaatgacaagggcc
caggctgtcaatgccagggatgctctggcaaagaagatctactcccatttatttgacttc
attgtggaaagaattaaccaagctctgcagttccctggcaagcaacacactttcattggt
gttttggatatttatggatttgaaacgtttgatgtgaacagttttgaacaattttgtatc
aattatgctaatgaaaaactacagcagcaatttaacctgcatgtctttaaacttgaacaa
gaagaatatatgaaggaagatatcccatggactttaatagacttttatgacaaccagcct
gtcattgaccttattgaagctaaaatgggaattttagaacttctggatgaggaatgcttg
ttgcctcatggaaaagatgaaaactggcttcaaaagctgtataataattttgtcaataaa
aacgcactctttgaaaagccaaggatgtcaaacacttctttcatcattcagcactttgct
gataaggtagaatataaatgtgaaggatttctggaaaaaaacagagataccgtacatgaa
gtattgattgaaatcttgaaagagagcaagtttcatctgtgtgcaaatttttttcaagac
agtccagtgtccgtttcacctttcagttcaactataaacatcaaatctgccagacctgtt
ctgaaatcacccaacaaacagctccggacgactgtgggcagcaagttccggaattctttg
tctttacttatggcgacactcaatgcaaccactcctcattatgtgagatgcataaagcca
aatgatgagaaattgccttttgagtttgattccaagagagttgctcagcagctgcgagca
tgtggtgttttggaaactattcggattagtgcacagagctacccatccaggtggacttac
attgagtttttcagccgttacagcattctcatgacacagcaggaactctccataaatgac
aagaaacagatttgcaagattgttttgcagaggctgatccaggatcataatcaatatcag
tttgggagaaccaaaatttttttcagagcgggacaggttgcttacttggagaagctgcgc
tcagacaagctgaggcaggcgtgcatcctgctccagaagcgtgtccggggctggctgcag
cggaggaggttcctggccatgcggagagcggcgctcacggtgcagcagtacttccgcggg
cagcgcacggtcaggcaagctataactgcaagaaatctgaagcaaacatgggcagccata
attatacagaaatactgtcggggttacctcgtccgtagactttgccagctcatccatgtg
gctgctgtaacaatacaagcttacacaagaggatttctagcaagaaaaaagtatcggaag
atgcgtgaagagcagaaggctgtggtcctccagaaatatgcccgagcgtggctcgccagg
cgccggttccagaacattcggcgctttgtgttgaatatccagctttcatacagagttcag
cagctgcagaaaaagatagaagagcagagtagagaaaatcatggtttgctggaacgattg
accaatctggcttcagctcatatgaatgacatggatacaattcagaaacttgaatcagaa
ctcgaaaaattaactgctcaaaagagaacgtatgaagagaaagggaaaaaatataaagag
gatagtgaacagaaaatcttaaaacttgagaatcagaataaagagttacaagaacagaag
gagaccttagaaataaaactccaagaaaaaaacgaggaaatgaaagagaaaatggatgac
ctcacacagcaactcttcaatgatgtacaaaaagaagaaaaccagcgaatgatacttgag
aaaaatttccaaaaccagaagcaggactatgaaaaggagattgaattgctcaagggagaa
attaagcttctgaaagaagaaaaaactcagctacagcaacaaattcagcaagaaattata
attcaggatggcttgaaaatggaagtaggacagcttacacaacaagcacagaaaatacct
gagttgcaaaaggaaatcgaacttcttcagacacagaaattggatgttgaaaagcaggcc
cactcacagaagagagaattgagggaaaagatgtcagaagttacaaagcagcttcttgaa
agttatgattttgaagatgtaagaagcagactctctacagaggatctggaacacttaaat
gaggatggagaactgtggtttgcttatgagggcttgaaaaaagccacaagggtattggaa
agccatttccagtctcagaaagaaatatatgagaaggagattgaaggtttgaactttaaa
gttgaacaccttagtcaagatattaatcatctacaaaaattattccgagaggaaaatgac
ataaatgatggcattcggcttgaagttagcaggctaacttcagaaaatctggtaatccca
gatcttaagcagcaagttgctgaacttgaaaatcaaaaattagatcttgaaaaccgtctt
caagagcagaccataaagttgaaagagatgtcaaatcggctgcattatgagctagaacgg
gataggacacaaagacgaactactgaggcccagaatgaagtagacataaaagaaaaagag
agtctgaaggacacaatccaaggaattgaggggctgagcaatggtttgatgcaagatgaa
gtccagggtgaactacaaagcaagataaagcaagtgacaactcgacttgctgtggaaaac
atggatcttgaagaaaagctagacatgaaagacaggataataagaaaattagaagatcag
atcaaaactctgaccaagactattgaaaaatctgaagcccatgtgcccactgtgcccaaa
gagtacattggaatgatggagtacaaaaaagaggacgaagaaaggatcattcagaatctg
atcctcgatttaaagccacgtggcgttgtggttaatatgatacctggccttccagctcac
atcctgttcatgtgtgtgaggtatgcagattacctgaacgatgctgacatgctgaagtct
ttcatgaatgtcaccattgatggcatcaagcaggttgttaaggaacattcagaagacttt
gagatgttgtccttttggctttccaacacatattattttcttaactgtttgaagcagtac
agcggggaagaggaattcatgaagtataacactccacgtcagaataagaactgtttgaag
cattttgatctctcagaatacagacagattctcagtgatttggccattcaactatatcac
caattcattattgtaatggagaacaacattcagcacatgattgtaccaggcatgctggaa
tatgaaagtcttcaaggaatttctggcttgaaacctacggggttccgtaaacgttcttct
agtatagatgacacggatacctacactatgacctctatcttgcagcagctcagctatttt
tatagcactatgtgtcagaatggcttggactctgagctcctaaagcaggcagtgaagcag
cttttctttctgattggagctgtcaccctcaatagcctcttcctccgcaaggacatgtgc
tcctgtagaaaaggaatgcagataagatgtaatatcagctacttggaagaatggcttaag
gacaagaatcttcaaagcagcaatgccaaagaaactttggagcccctgtctcaagcagcc
tggctccttcaggttaaaaagatcacagatgatgatgccaaggaaatatgtgaacactgc
acatctctttctactgtgcagatagttaagatcctgaactcatacactccaatagatgac
tttgagaaaagagtgactccatcgtttgttcggaaggtccaggctatgctaaacaaccgt
gaggatgttccacagctgatgcttgataccaagcatctctttcaagtgacatttcctttc
accccctctccacatgctttggaactgatacaagtccccagcagcttcaaacttggcttt
ctcacgagggtttaa
DBGET
integrated database retrieval system
