Anomalospiza imberbis (cuckoo-finch): 137482158
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Entry
137482158 CDS
T11605
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
aib
Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137482158 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aib03036
]
137482158 (SIN3A)
Chromosome and associated proteins [BR:
aib03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
137482158 (SIN3A)
REST complex
137482158 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
137482158 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
137482158
NCBI-ProteinID:
XP_068060489
LinkDB
All DBs
Position
13:complement(19002595..19035456)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQ
PAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSTENMENLDKVECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacccgtgtatgcgtcgcagcagagacgtatc
accagcagcaccgaggcgttcccgcaccagcaccgcgtgctcgccccggccccgccggtc
tatgaggcggtttccgagaccatgcagtcggccacggggatccagtactccgtaactccc
agctaccaggtgtcggccgtgccgcagagctcgggcagccacgggccggccatcgccgcc
gtgcacagcggccaccaccaccccgcgcccgtgcagccccacggcagccaggtggtgcag
agccacacgcaccccacgcccccggccgtgcctgtgcagggccagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctacagtttggtagtcag
ccacaggtctacaatgacttcttggatattatgaaggaatttaaatctcaaagcatcgac
actccgggggtgatcagccgtgtgtcgcagctcttcaagggccacccagacttgatcatg
ggcttcaacaccttcctgccacctggctacaagattgaggtgcagaccaatgacatggtg
aacgtgaccaccccggggcaggttcaccagatccccacccacgggctgcagccccagccg
cagccgcagccgccgcatccgtcgcagccctcggcgcagtcaaccccgacaccagcacag
ccggcaccacagcccacacctgccaaaatcagcaagccatcgcagttgcaggctcatact
cctgccagccagcagacccccccgatcccgccgtacgcgtcgccgcgctcgccgccggtg
cagccgcacacgcctgtgacaatctctctgggcaccacaccatccctgcagaacaatcag
cccgtggagtttaaccacgccatcaactacgtcaacaagatcaaaaatcggttccaggga
cagccagacatttacaaagccttcctggagattctccacacgtatcagaaagagcagcgt
aatgccaaggaggcaggagggaactacacaccagctctgacagagcaggaggtctatgcc
caggtagctcgcctcttcaagaaccaggaggatctgctctcggaatttgggcaattcctg
cctgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggaatcggtc
aggaatgaccacgggggcacggtgaagaagccgcagctcaacaacaagcagcagagaccc
aaccagaatggctgccagatccgaaggcactcgggcactggagcaacccctccggtgaag
aagaaaccaaagctgcttggtttgaaagaccagtcattggcagaagccagcaaacatggt
gtggggacagaatctctcttcttcgagaaggtccgcaaagctctgcgtagcacagaggcg
tacgagaacttcctgcgctgcctggtgattttcaaccaggaggtgatctcccgggccgag
ctcgtgcagctggtctctcccttcctggggaaattcccagaactgttcacttggtttaaa
aactttctgggatataaggagtctgttcacatggagacatatccgaaggagcgggctact
gaggggattgccatggagattgactatgcctcctgcaagaggctgggctccagctaccga
gccttgcccaagagctaccagcagcccaagtgcacggggaggactccactgtgtaaagag
gttttgaatgacacctgggtctccttcccatcctggtctgaagattccacatttgtgagc
tccaagaagacacaatatgaagagcacatctacaggtgtgaggacgagcgttttgagctg
gatgttgtcttggagaccaacctggcaaccatccgcgttctcgaggcaatccagaagaag
ctgtctcgtttgtctgcggaggagcaggccaaattccggctggacaacaccctggggggc
acctcggaggtgatccaccgcaaggctctccagaggatatacgctgacaaagcggctgac
atcatcgacgggcttcgcaagaacccctcggtggctgttcccatcgtactgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagagaggatttaataaagtctggcgagag
cagaatgagaagtattacctgaaatccttggaccaccagggcatcaacttcaagcagaat
gataccaaggtcctaaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagaacaggcttcagaagacaatgctggagtccccacaggcccacacctctcgctc
gcctatgaagacaagcagatcctggaggacgctgcctctctcatcatccaccacgtgaag
cggcagacgggaatccagaaagaggacaagtacaaaatcaagcagatcatgtatcacttc
attccagacctgctgtttgctcagcgaggtgaactctcggatgtggaagaggaagaagaa
gaggaaatggatgtggacgaagctactggggctgcaaaaaagcacaacggtgttgggggt
agtcctcccaaaaccaagctgatgttcaacaacacgacagctcagaagctgcggggcatg
gatgaggtctacaacctcttctacgtgaacagcaactggtacatcttcatgaggctgcac
cagatcctgtgcttgcggctgctgcggatctgcacccaggccgagcggcagatcgaggag
gagacgcgggaacgggagtgggagagggaagtgctgggcataaagcgagacaagagcgat
agtcctgccatccagctgcgactgaaggagcccatggacattgatgttgaggattattac
ccggccttcctggacatggtgcgcaacctcctggatgggaacatggactcgtcgcagtac
gaggactcgctgcgcgagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgatccagagcatcgtccgacagctccagcacatcgtgagcgatgagatctgtgtgcag
gtgacagacctgtacctgtcagagaacagcaacggagccacgggagggctcctggcgtcc
cagtcctcccgcacgctcctggaagccgcctaccagcgcaaagctgagcagctcatgtct
gaggagaactgcttcaagctgatgttcattcagagcagaggtcaagttcagttaaccatt
gagctgctggacacagaagaggaaaactcggatgaccctgtggaagcagagcgctggtcc
gactacgtggagcggtacgtcaactctgattctacctcccctgagctccgcgagcacctg
gcccagaaacccgtcttcctgcccaggaatctgaggcggatccgcaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaaaaagtccacggagaacatg
gagaacctggacaaggtggagtgtaaattcaagctgaactcctataagatggtgtacgtg
atcaaatcagaggattacatgtacaggaggaccgcgctgctgcgagctcagcagtcccac
gaaagggtgagcaaacggctgcaccagcggttccaggcctgggtggacaaatggaccaag
gagcacgtgccccgcgaaatggcagccgagacaaacaagtggctcatgggtgaaggcttg
gagggcttggtgccctgcaccaccacctgtgacacagagaccctgcactttgtcagcatc
aacaagtaccgcgtcaaatacggcacgatattcaagacaccctaa
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