Anomalospiza imberbis (cuckoo-finch): 137482282
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Entry
137482282 CDS
T11605
Symbol
CSTF2
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137482282 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137482282 (CSTF2)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137482282 (CSTF2)
U7-dependent histone pre-mRNA processing factors
137482282 (CSTF2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
137482282
NCBI-ProteinID:
XP_068060626
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Position
14:complement(949123..956403)
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AA seq
594 aa
AA seq
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MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPI
GGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
VGRDPRGLEPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEP
RGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGQGAGQPGGF
SPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgggaccccgccgtggatcgctccctgcgctccgtgttcgtg
gggaacatcccgtatgaggccacggaggaacagctgaaggacattttctcggaggttggg
cccgtggtcagctttaggctggtgtacgacagggagacgggcaagcccaagggctatggc
ttctgcgagtaccaggaccaggagacggcgctcagcgccatgcgcaacctcaacgggcgc
gagttcagcggcagggccctgcgcgtcgacaacgccgccagcgagaagaacaaggaggag
ctcaagagcttgggcacaggtgcacccatcatagagtcaccctacggggaccctgtcaac
cccgaggatgcccccgagtccatcagccgggcagtggccagcctgccgcccgagcagatg
ttcgagctgatgaagcagatgaagctgtgtgtccagaacagcccccaggaagccaggaac
atgctgctccagaacccccagctggcttacgcactgctgcaggcccaggtggtcatgagg
atcgttgacccggagatcgcgctgaaaatcctgcatcgccagaccagtgttcctcctctg
atcccaggcaaccagcaggcagtgccagggccggggcctgggccaggcccggggcctggg
ccagggcccaacgcgcagctgaacccgcagaacaccccgtcgtcccagccacagcccata
ggcgggatgcacgtcaacggcgctcctcctctgatgcaaccacccatgcaggggggagtg
ccagccccaggacagatggcagcccctgtgcagggcccaggccctggccccatggctcca
ggaggtgggatgcagccacaggttgggatgccgggtgcagggcccgtccccttggagcgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgc
gttcaagtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagt
ggcccgccgccccgaggccttttgggagatgccccgaatgaccctcgcggagggaccctg
ctctcagtcactggagaagtggagcccagaggttaccttgggccgccccaccagggagcc
cctatgcaccatatgcctggtcatgacagccgtggccccccccatgagatgaggggggga
cccatgggagaaccccgaccactgatgggagagccgcgggggcccttgatggatgctcga
gtcggaagagatccccgagggctggagccacgagggctggagccacgcgggctggagccc
cgggtgatggaggcgcgagcgctggaggcgcgaggcctggagccgcgggtgctggagcca
cgagtgctggaagccagggccatggaggccagggtcctggagccccggggcctggagcct
cgagggcctggtcccaacccgcgtggcccaatgcctggtgggatacagggtcctgggccg
cttaacatgggagccagtggcccgcaggggccccgccaggttcctaacatggctggggca
ggcatgcagggaggaggcatacctggggcaggacaaggagctggtcagcctggaggcttt
agccctggacagagccaggtcaccccccaggatcacgagaaggcagcactgatcatgcag
gtcctgcagctgacagcagaccagatcgccatgctgcccccagaacagcggcagagcatc
ctcattctgaaggagcaaatccagaaatccacgggggcaccctga
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