Anomalospiza imberbis (cuckoo-finch): 137482307
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Entry
137482307 CDS
T11605
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137482307 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aib01009
]
137482307 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aib04515
]
137482307 (PCDH11X)
Protein phosphatases and associated proteins [BR:
aib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137482307 (PCDH11X)
Cell adhesion molecules [BR:
aib04515
]
Cadherins
Protocadherins
137482307 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_2
Ig_Cad99C_N
Cadherin_FAT4_N
Fibulin_C
K319L-like_PKD
TMEM154
Ig_TRS130_1st
VirB8
Motif
Other DBs
NCBI-GeneID:
137482307
NCBI-ProteinID:
XP_068060653
LinkDB
All DBs
Position
14:complement(2360988..2787338)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCHQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHMKEVGRPQTPLKETTLESWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
STSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILG
HSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRP
QFYNTCERHCAGEDPVKVIPLANFAASHPAPGAGSSATFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcctgttggcctgcatcgtgttccaa
tctggcgcacaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatctgctcaaggatctcaacctaacgctggaccctgacgtgcccctgtcctccccg
ctgcagttcaagctcgtgtacaagaccggggatgtgcccctggtgagggtggaggagaac
actggggagatcttcacggctgccaaccgcatcgaccgcgagaagctgtgcgccggcatc
ttcagcgagaaccgctgcttctacgaggtggaggtggctgtgctgcccgacgaggtgttc
agactggtcaagatcaggttcctgatcgaggatataaatgacaacgccccccttttcccc
tcgacagttattaacatctctattcctgagaacacggccattaattcccgctactctgtc
ccgtctgccatcgacccggacatcggggtgaacggaatccagcattatgagctcctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgaccagggtcaaaatgta
tttggtcttgacataactgagacacctgagggagataagtggcctcaactgattgtccag
cagatcctggatagggagcagaaggacacctatgtgatgaaaatcaaagttgaagatggt
gggagccccccgaggtccagcactgccatcctgcaggtgacggtgaccgatgtcaacgac
aaccgcccggtcttcaaggagaacgacgtcgaggtcagcgtgcccgaaaatgcccccgtg
ggcacctctgtgtctcagctccacgccaccgacgcagacctgggctccaatgcacaaatc
cacttctatttcagcaaccagatctccagcctggccaaaaggctctttgccatcgataac
accactggcctcatcaccatcagggagccgctggacagggaggaatctcctgttcacaaa
ttgactgttctggccagcgatggcagctccactccgtcaagagccacggtgactgttaat
gtcacagatattaatgacaatgtcccgtccatagacaccaggtacatcatcaatccggtg
aatgggacagtgcttttgtctgagaaggccccccttaatacaaaaattgctttgataaca
gtgatggacaaggatgctgatcagaatgggaaagttacctgttttacagatcatgatgtt
cctttcaggctaaaaccagtgtttgataatcagtttctcctggagacagccacctttcta
gactatgaagctacacgggaatatgccatcaaaatagtggcttcagattcagggaagcct
cccttaaaccagtctgcaatgctcctgatcaaaattaaggatgaaaacgacaacgcccca
gttttcacacagcctatcataggcctttccatccctgaaaacaacgctcctggtactcag
ctaaccaagatcagtgctacagatgctgacagcgggcggaatgccgagatcagctacatc
ctgggttccgacgcgcccccaattttcaacctggaccgccgcacaggcatcttgacagcc
gtgagaaagctggacagagaaaagcaagacaggtactctttcactgtgctggctaaggat
aatgggatgccacctttgcagaccaatgctaccgtgacggtgtcagtgctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggcttatcacagttacggatgctgacgcgggagacaacgctgca
gtcactctctctatcttaaatggtagagataatttcattatagatccacttactggtgta
ataaggcctaatataacctttgatagggagcagcaggggtcatacactttccaggtgaaa
gcagtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgataacaggcctgtttttgttattccctcatctaattattcctatgagttg
gtcccaacgtcagcaagcccggggtctgtagtcactaaagtctttgcagttgataatgac
acgggaatgaacgcagagctccgctatagcatcataggtgggaactccaggggcttgttt
accattgaccaattaacaggcaatatcactttgaaagagaaggtaattacatcagatcat
ggcctgcacagactggtgatcaaggtgaatgacctgggacagccggagtctctttacacg
atagctcttgtgcacttgtttgtgaacgagacagtcaccaacagctcctacgtgcaagag
ctggtgcgtaggaatatggaaactccagttggccagaacattggggatggtgagataacc
ccacagaccaatgattacgtcaagatcatcattgccattattgcaggcaccatgacagtt
attctggtaatttttgttaccgctttagtccggtgccaccagacgcccaggcacaaggtt
gtccaaaaaaataagcagagtggtgaatgggtttcccccaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccaaagagtctcctcctcaactttgtgact
attgaagaatctaagcctgatgatcctggccacgagcacataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaaacctgatagcccagacttagcaaagcactacaagtctgcttctccacagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaattg
cctctagataacacctttgtggtgggctgtgactcactttccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacatgaaagaggtgggaaggccacaaactcctttgaaagaaacg
accttggagtcctggactcagccacagccccagcgccgcgtcaccttccacctgccagat
ggctcccaggaaagctgcagtgacagcgggctcggagaccacgagcccacgagcggggcc
agcacatcccacccgctgcccctgggcttcccccaggacgagttctacgagcaggcgtcc
cccaacagccgcacggagggagacggcaactccgaccccgagtccactatcgaagtgaac
ctgcagaaagctctggccgaagcctctgagaactgcacgcaggagtgcctcatcctcggc
cactccgacaactgctggatgccgccggccctgacgcagttccagcagcccaacacctcc
ttgccatcgtttggcttccagcaaggctggggccgaggagccagacccgagggacgtcac
actctcgggaggcccctgccaaaggacgacagtgacaaaggccagggagggcccaggccc
cagttctacaacacctgcgaaagacattgcgccggcgaggatcccgtcaaggtcatcccc
ctggcaaacttcgccgcgtcccacccagcgccgggggctggcagcagcgccacgtttata
cacgagcaccagctgtga
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