Anomalospiza imberbis (cuckoo-finch): 137482501
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Entry
137482501 CDS
T11605
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03013
Nucleocytoplasmic transport
aib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137482501 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
137482501 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137482501 (THOC2)
03041 Spliceosome [BR:
aib03041
]
137482501 (THOC2)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137482501 (THOC2)
Spliceosome [BR:
aib03041
]
Complex C
Other components
EJC/TREX
137482501 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137482501 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
137482501
NCBI-ProteinID:
XP_068060939
LinkDB
All DBs
Position
14:complement(9922172..9971829)
Genome browser
AA seq
1594 aa
AA seq
DB search
MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD
QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK
ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS
GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL
CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAITEEHKREIV
EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSI
MDQMPPFYSTSHKPIAIALCRLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF
EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLL
SITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQ
TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL
TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYV
ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKK
SSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL
ASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQH
KVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVN
KLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWL
LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDI
IYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNK
ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQAL
ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNG
PGGAGMPTSLTINTVRLEEGTTEETADKLKEKSQGVVKVINKTVNATPKVTTSNGNSTSN
SKIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDEKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENA
KGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHY
INHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKEKGDSIKAEKMEKSSSGSKK
ESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag
tttgtgcagctgtgtcgtgctctcagtgaaaacaaaaatcatgatgtgggtttcagagat
attcagcaggctttgtatgagcttgcttaccacgttgtcagaggaaacttaaagcatgat
caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttctatccta
gctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg
gatcactttacacagctggtattggcctgtttgtatcttgtatctgacactgtcctaaag
gagcgtttagatccagagacactggagtcactgggactcatcaagcagtctcaacagttc
aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg
ctaagagaggagaatgaaggttatgcaaagctcattgcagaattgggtcaagacttatct
ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgttttaat
cttgaccctaacagagttttggatatcatcctagaagtctatgagtgcaggcctgagtat
gatgatttctttgtaccactgatagagtcttacatgtacatgtgtgagcctcaaactcta
tgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagaccccttcc
tccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagatctt
tatgttcatcttctaccaggggataatgccatcaccgaggaacacaagcgggagatagta
gaagctaaacaaattgtcagaaaacttacaatggtcgtcttatcatctgaaaagactgag
gaaaaggagaaagaaaaggaaaaagaggaggagaagactgaaaagcctcctgataatcag
aaacttggcttattggaagccttattaaaaattggtgattggcaccatgcacaaagtatt
atggatcagatgcctccattttactctacttcgcacaagccgattgcgatcgcgctttgc
cggctcgtccacgtgacaattgagcctctgtaccgcagagttggtgtacctaaaggagct
aaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcagagagcttt
gaggaattgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccat
gatcctattttatttgcaaaagtagtgcgccttggaaaagcatttatgaaagagtttcag
tctgatggaagcaagcaggaagataaagagaaaatggaaacactgttcagctgtttgttg
agtattactgatcaagtcttgcttccatctctttccttgatggactgcaatgcatgcatg
tctgaggaattatggggaatgttcaaaacctttccataccagtaccggtaccgtctctat
gggcaatggaagaatgaaacatacaatagtcacccactgcttgtgaaagttaaagctcaa
accatagatcgagccaaatacataatgaagcgtttaactaaggaaaatgtgaaaccctct
ggaaggcaaattgggaagctcagccacagcaatcctacaattttatttgattatatttta
tcacaaatacaaaaatatgataacttgataactccggttgttgattcgctgaaatacctc
acttccttgaactatgatgtcttggcatattgtatcattgaagcattggcaaaccctgag
aaggagagaatgaagcatgatgacactacaatctcaagctggctgcagagcctggcaagc
ttttgtggtgccgttttccgaaaatacccaattgaacttgcaggcctcctgcagtatgta
gccaaccagctgaaggctggcaaaagctttgatttgcttattttaaaagaggtagtgcag
aaaatggcagggatagaaattactgaagaaatgacgatggaacagttggaagccatgact
ggtggagaacaactgaaagctgagggtggatactttggccaaatcaggaatacaaagaaa
tcatctcagagattaaaagatgcattattggaccatgatcttgccctcccactgtgcctg
cttatggctcaacagagaaatggtgtcgtctttcaagaaggaggggaaaaacatctgaag
ctggtgggaaaactgtatgatcagtgccatgacaccctggtacaatttggtgggttttta
gcatccaatctaagcacagaggattacattaagcgagtgccttctattgatgttctctgt
aatgagtttcacacacctcatgatgctgcatttttcctctcgagacccatgtatgcacac
cacatttcatcaaagtatgatgaactaaaaaaagctgagaagggaaataaacagcagcac
aaagttcacaaatacattacatcatgtgagttggtgatggctcctgttcacgaagctgtg
atttctctgcacctccctaaagtctgggatgacatcagccctcagttttatgctacattc
tggtctttaacaatgtatgaccttgctgtgccacacagcagctatgacagagaagtcaat
aaacttaaagtccagatgaaagccattgatgacaatcaggaaatgcctccaaataaaaag
aaaaaagaaaaagaacgttgcacagctctgcaggacaagctccttgaagaggagaagaag
cagttggagcatgtgcagagggttctacagagactgaaactagagaaagataactggctt
ctggcaaaatctaccaaaaatgagactatcaccaaatttttacagttgtgtatatttcct
cgctgcattttttcggccattgatgcagtgtactgtgctcacttcgttgaactggtacat
cagcagaaaacacccaatttctccacacttctctgctatgaccgagttttctctgatatt
atatatacggttgcaagttgcacagaaaatgaagccagtagatatggcaggtttttatgc
tgtatgctggagactgtgaccagatggcacagtgatagagtcatatatgaaaaggaatgt
ggcaactatccaggtttcctaactatattgcgagcaactggatttgatggtggaaataag
gctgatcagttggattatgagaattttagacacgtggtacacaaatggcactataaatta
actaaggcttctgtgcactgtctggaaacaggtgaatatacacatatcagaaacatcttg
attgtgctgaccaaaatccttccatggtatccaaaagtgctgaacctgggtcaagccttg
gaaagaagagtacacaagatatgtcaggaagagaaagagaagagacctgatctatatgca
ttggctatgggctattctggacagttgaaaagtaggaagcctttcatgatacctgaaaat
gaatttcaccacaaagacccacctgccaggaatgctgtacctgcaacagtacaaaatggg
ccaggtggtgctgggatgcctacgtctctcacaataaatacagttagactggaggagggc
actactgaggagactgcagataaactaaaggagaagtctcagggtgtggtgaaagttatt
aataaaactgttaacgctacaccgaaggtgacaacaagcaatggaaacagtacatctaat
agcaaaattattaaagagaaagatgataaagaaaaaagtgggaaggaaaaagataaagaa
aaaaaagacaagactccagctgccactccggagatgaaggcacttgggaaagatgggaaa
gataaaccgaaggaagaacgggcaaacaaagatgagaaagcaagagagattaaggagaaa
acgccaaaatctgacaaagagaaggaaaaggtgaagaaagaagaaaaagcttcaaaagaa
gaaaagtccaagacggttgttaccatcattgagtcaaagtcaactgcagaaaaggagaga
gaaaaggagccgtccagagaaagagatctagcaaaggaaatgaaatccaaggaaaatgct
aaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaa
acatcagaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccgtca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactac
ataaaccacactactccaacactgtccaagagtaaggagagagaagtggagaagaaagat
ctggacaagtcaagggaaagatccagagagagagagaagaaagatgaaaaggacaggaaa
gatcgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattcaactaaacga
cgcaaagaggaaaatggcacaactggttcttcaaaacatagcaaaagtgaaagtccttct
gattcccctcgcttaaatgaaaaagagaaggagaaaaacaaatcaaaatcttcaggaaaa
gagaaaggtgattcaatcaaggcagaaaagatggagaagagctcctctggtagcaaaaag
gaatccagacacgataaagaaaaggcagagaagaaagaaaagcgggacagtactgggggg
aaagaagaaaagaaacatcataaatcttcagacaagcatagataa
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integrated database retrieval system
