Anomalospiza imberbis (cuckoo-finch): 137483678
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Entry
137483678 CDS
T11605
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aib01002
]
137483678 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aib04121
]
137483678 (USP42)
Enzymes [BR:
aib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137483678 (USP42)
Peptidases and inhibitors [BR:
aib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
137483678 (USP42)
Ubiquitin system [BR:
aib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
137483678 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
137483678
NCBI-ProteinID:
XP_068063077
LinkDB
All DBs
Position
16:complement(9780068..9798541)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDITLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPSMTDPSKTQKITISIHNKLPTRQAVPQAECLSSAVEEEDLKPLPS
ATITNSSAAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNMVPFGAEPSGK
SEESKGLFKRHCNVISSNGILIGKMVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLEVVPKALSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDNDGVTDTVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENLLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDVTDKCQDIKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGPSNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKPDDHSHRRRSSHSMETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
ERRSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSHFEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASTEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtaccccctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcag
caaacacaaagtgttggagttggactgcagaacctcggcaacacatgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcacttgagcac
accaagtcctgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcttgtgttgctctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccactttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcggatacatacgagccatttctcgacattactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttccagcgtcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaagagatttgcaaattttacg
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccagtctattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tacgtacttttttatatcaggcgctacgatctgacgctgggggagcgagccttttacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggggccaacagcaagcaggct
gcgttcatgggacctcggcttcctcctcacatgattaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtactgttggtgttgctgtaaaaaggccatcttca
gctccacctacagcttgtgttcaaaactgggcaatttccaggccttcaatgacagaccct
tccaaaacccagaagatcaccatcagtattcacaacaagctgcccacacggcaggcggtg
ccgcaggcggagtgtctgagcagcgctgtggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttccgcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtgaat
ggaaaccctaagctctgttctgataacatggtccctttcggtgcagaaccttcaggaaaa
tccgaggagtccaagggcttgttcaaaaggcattgcaacgtcatatcttccaatggaatt
ctgattgggaagatggtccgtacgttgcataattcccattcatcctgtcagaatgcagaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttccgagattttcttctctaaagcaaatggagtgcttgaagtggtgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacgtacagccagttgaacagcttg
tcggaggaaaagagtgtctctggacctcagaagtcttctgacaatgacggagttacagat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagactctgaaactatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaacggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaatctcttgtacatcaaaggatctcctgagagcaaagagaaattagggcagatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatgttacagat
aaatgccaagatataaaggacatttctaataactatgtagaggtaccacctgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaggga
cccagtaataaaatatgtgaagatgacgataaacatatgaaaaaaaataagaaaaaaatc
cacgactctaaaagaactgacaaagagcactaccggaggaagagagaaaactcggacact
gaggagaaggagaggcaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcatggaaacaaacaagcagagccgtcataagcaggagtattgcagtgagagc
aagtacagatcctcccacaatgaaagaaacagtcccagtaatggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatccagacaggaataggtattat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaaccacggaga
tgggaaaaatgcaggtactacaatgattattattcctcccatggaacgagggatggtagg
gagaggaggtcctctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcattgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcggaaaaatactcccgtgaaaggcacgcacttccaccagtgtcagctcactcacat
tttgaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgccgaaagacagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttattggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
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