KEGG   Anomalospiza imberbis (cuckoo-finch): 137484029
Entry
137484029         CDS       T11605                                 
Symbol
SDC4
Name
(RefSeq) syndecan-4 isoform X1
  KO
K16338  syndecan 4
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04512  ECM-receptor interaction
aib04514  Cell adhesion molecule (CAM) interaction
aib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137484029 (SDC4)
   04514 Cell adhesion molecule (CAM) interaction
    137484029 (SDC4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137484029 (SDC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:aib00535]
    137484029 (SDC4)
Proteoglycans [BR:aib00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   137484029 (SDC4)
SSDB
Motif
Pfam: Syndecan Protocadherin Glycophorin_A
Other DBs
NCBI-GeneID: 137484029
NCBI-ProteinID: XP_068063652
LinkDB
Position
17:5507468..5524796
AA seq 203 aa
MCSGSEPSVKCFWRIVMYLTCLPLHLQVRETETMDAGWLDYPASGDLPDDEDISDFRPHL
TSDGLDIDETSGSGDYPDSEDGLYLTTMDTPVISDNYIPGDTGRKIEGEKKNTMVDNEII
PDKAVPVEENLSNKISMASTANSSIFERTEVLTALIAGGAVGLLFAIFLILLLVYRMKKK
DEGSYDLGKKPIYKKAPTNEFYA
NT seq 612 nt   +upstreamnt  +downstreamnt
atgtgctcaggctctgaaccttctgtgaaatgcttctggagaattgttatgtatttaaca
tgtctccccctccatttacaggtgagagaaactgaaaccatggatgctggatggcttgac
taccctgcctctggggacttgccagatgatgaagacattagtgatttcaggcctcactta
acctctgatggcttagatatagatgagacatctgggtcaggagactatccagactctgaa
gatggcttgtatctgaccaccatggatacccccgtgatatctgacaactatatccctgga
gatactgggagaaagatagaaggtgagaagaaaaacacaatggtggacaatgaaatcatt
ccagacaaagctgtacctgtcgaagagaacctgtccaacaagatctccatggcaagcaca
gccaacagcagcatctttgaaagaacagaagtccttacagctctcattgcaggaggagca
gtgggtctcctgtttgctatcttcctgatcctgctcttggtctatcgcatgaagaaaaag
gacgagggcagttacgacctggggaagaaacccatctacaagaaagcccccacaaacgag
ttctatgcctaa

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