Anomalospiza imberbis (cuckoo-finch): 137484763
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Entry
137484763 CDS
T11605
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04142
Lysosome biogenesis
aib04144
Endocytosis
aib05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137484763 (CLTCL1)
04142 Lysosome biogenesis
137484763 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137484763 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137484763 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aib04147
]
137484763 (CLTCL1)
Membrane trafficking [BR:
aib04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
137484763 (CLTCL1)
Exosome [BR:
aib04147
]
Exosomal proteins
Proteins found in most exosomes
137484763 (CLTCL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
137484763
NCBI-ProteinID:
XP_068064971
LinkDB
All DBs
Position
18:8650549..8684484
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGNYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMEHSLLQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLFLVKPYLRSVQNHNNKGVNEALNNLLTEEEDFQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccattcgcttccaggagcacttccagctccaaaatttgggcatt
aatccagcaaatattggattcagcaccctaacaatggaatctgacaagttcatctgcata
agggagaaagtaggagagcaggcacaagtagtgataattgacatgagtgatccaacaaca
cccatcagacgtccaatttctgcagaaagtgccatcatgaatccagcctccaaagtaata
gctctaaaagctgggaaaacacttcagatctttaatattgagatgaaaagtaaaatgaaa
gcccacacaatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtgtaccactggagcatggagggagaatcacaaccccaaaag
atgtttgatagacacgctagtcttgcaggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagttgtattcggttgatagaaaagtctcccaacctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctaccctcttttgttttgctgtg
aggagtcctgcaggaggcaagctgcacataattgaagtgggtcagccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgtaatttatctgatcaccaagtatgga
tatatccacatgtatgatttggagtctggagtgtgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcatgaacctacctcaggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgctacgaat
gttctccagaatcctgacttgggactgcgaatggctatacgtagtaacctagcgggggca
gaggagttatttgccagaaagttcaacacactgtttgctcaaggaaactatgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaattaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttggaata
ttgcttgaccagggacagctgaacaagtttgaatctctggagctctgtcgccccgtcctg
cagcagggtcgcaaacagcttctggagaagtggctgaaggaagacaagctggagtgctcg
gaggagctgggagacttggtgaagacggctgacccaacccttgcactcagcgtctacctt
cgagctaatgtgccaaacaaagtgattcagtgttttgctgaaactggccaattccagaaa
atcgtgctgtatgcgaagaaggtgggctataccccagactggatcttcctactgagaagt
gtgatgagagtcagtccagaacaaggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtagatgtgttcatggagcacagtcttctgcag
cagtgcacatcctttttgttggatgccctgaaaaataaccgccctgcagaaggccacctt
cagacccgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctc
ggaaaccaaatgtttacacactatgatcgtgctcatgttgcccagctgtgtgaaaaggca
ggcttgctccagcgagctttggagcactacacggatctctatgatattaaacgtgcagtt
gttcatactcacctcttgaatcctgagtggcttgtgaacttctttggctctctctcagtt
gaagactctgtggagtgtttgcgtgccatgctgtcagccaacattaggcaaaacctacag
ctgtgtgtgcaagttgcttctaaataccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
tttagccaggacccagatgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgttataacccagaacgagtgaag
aacttcctgaaggaggcaaagctcacagatcagcttcctctgatcattgtctgcgatcgg
tttgactttgttcatgacctggtgctctatttatatcgcaataatctgcagaagtatatt
gagatctatgtacagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtagattgttctgaggatgtcatcaagaacttgatcatggtggtgagagggcagttc
tccacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgctttggcc
aaaatctacattgacagtaataataatccagagcgcttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgtgttgct
tatgagagggggcagtgtgatctggaactcataaaggtgtgcaatgagaactccctgttt
aagagcgaggctcgctatctggtgcgcaggaaggaccctgagctctgggcaaatgtactg
gaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacggctttatca
gagacacaggatccagaggaagtttctgtaacggtgaaagctttcatgactgctgatctg
ccaaatgaactgattgagttattggaaaaaattgtgttggataattctgtattcagtgaa
cacaggaatctccagaatctgctgatcctgactgccattaaggctgaccgcacccgagtg
atggaatacatcaatcggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctatacgaggaagcctttgctatattcagaaaatttgatgtcaatacttca
gcaattcaggtgttgattgagcacattggcaacttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtgtggagccaactggccagagcacagctccagaaggacttg
gtgaaggaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtc
gttcaggcagctaatagaaatgataattgggaggacctagtcaaattcttacagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccacatacagcag
gtcggtgatcgctgttacgaagaggggatgtatgaagcagcaaaacttctctataacaat
gtatccaactttgctcgcctggcatctaccttggtgcaccttggggagtatcaggcagca
gtggacagtggccgcaaagccaatagcacaaggacttggaaggaggtctgctttgcctgt
gtggatggaaaagaattccgcttggcacaaatctgtggcttacacatagtcatccatgct
gatgaacttgaggagctgatcagttactatcaggatcgtggctactttgaggaactgatt
gcccttttggaagctgctttgggcctagagcgtgctcacatggggatgtttactgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagcttttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctgtatgacaagtatgaggagtatgacaatgcaataattactatgatgaat
catccaactgatgcctggaaagaaggccagtttaaagacataattgccaaggtggccaat
gtggagctgtattacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatctcctgcttgtattatctccacgactggatcacaccaggacagtcaattttttctca
aaggttaatcagctatttctagtaaagccttacctgcgttcagtccagaaccacaacaac
aaaggagttaacgaggctctgaacaaccttttaacagaagaggaagatttccagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcgtacttgtacaagggtaacaaccgc
tggaagcagagtgtggagctgtgcaagaaagaccgtctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagagctggctgagaagctgctccagtggttcctggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgctatgacttgctgcacccagat
gtagtccttgagttggcatggagacataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatggactgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagctgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatatggatacacagcgccaggattcacccagccgcctgtttatggtttcaatatgtaa
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integrated database retrieval system
