Anomalospiza imberbis (cuckoo-finch): 137484948
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Entry
137484948 CDS
T11605
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03013
Nucleocytoplasmic transport
aib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137484948 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
137484948 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137484948 (THOC5)
03041 Spliceosome [BR:
aib03041
]
137484948 (THOC5)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137484948 (THOC5)
Spliceosome [BR:
aib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137484948 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
137484948
NCBI-ProteinID:
XP_068065286
LinkDB
All DBs
Position
18:complement(12563217..12577318)
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AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTDQDVRYYSEESEVDLRDPIKDYELYRETCQ
ELQRLMAEIQELKSRGIKENASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYKEAPPEISRPAITL
TEPHQQTLARLDWELEQRKRLAEKYKECLTSKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTLDLKCKDENVL
HLTFHYLMNLNVMTVKAKVTTAMEMTTAISAGDLLSPDSLLNCLYPGDHGRKTPNPANQF
QFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVAADNSLSASHMELTVKLLR
SRLQSRLALHKQFASLEHGVVPVSSECQQLFPTKIVSRLVKWTAIPFEDYAELPYTKDVI
EAGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSTLPPIFSLCLNWKGERNSSNDDNIRA
MESEVNVYYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKMCLR
LVRGPLRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacggacggggtccca
gccgagggcaagaggggcaagggcgacacggaccaggatgtcaggtactacagcgaggag
agcgaggtggatctgcgtgaccccatcaaggactacgagctctacagggagacctgccag
gagctccagaggctcatggcagagatccaggagctgaagagccggggcatcaaggaaaat
gcctcggagatcgacgagcggcgcgtccagagctgtgtccacttcatgaccctgaagaag
ctgaaccgcctggcccacatccggctgaagaagggcagggaccagacccacgaggcaaag
cagaaggtcgatgcctatcacctgcagctccagaacctgctctacgaggtgatgcacctg
cagaaagagatcaccaagtgcctggaattcaaatccaaacatgaggagatcgagctggtg
agcctggaggagttctacaaagaggctccccctgaaatcagccgccctgccatcaccctg
actgagccccaccagcagaccctggcccgcctggactgggagctggagcagcgcaagagg
ctggcagagaaatacaaggagtgcctgaccagcaaggagaagatcctgaaggagattgag
gtgaagaaggaatatctgagcagcctccagcctcgactcaacagcatcatgcaggcctcc
ctgcctgtgcaggagtacctgttcatgcccttcgaccaggctcacaagcagtacgagacc
gcccggcacctcccgccgcctctctacgtcctcttcgtccaagccagtgcctacggacag
gcctgtgataagaagttggtggtggccattgaagggagcgtggaggaagccaaggccctt
tataagccccctgaggactcgcaggatgatgagagcgattccgacgcagaggaggagcaa
accacgaagcggcgcaggcccactctgggcgtgcagctggatgacaaacgcaaggagatg
ctgaagagacaccccttgtcagtcaccctggacctgaagtgcaaagatgagaacgtgctt
cacctgaccttccactacctgatgaacctcaacgtcatgacagtgaaagccaaggtgacc
actgccatggagatgaccacagccatcagtgctggggacctgctctccccagactccctc
ctcaactgcctctatccaggggatcacgggaggaaaacgcccaacccggccaaccagttc
cagttcgataaagtgggcatcctgaccctgagtgactacgtgacagagctgggacacccc
tatgtgtgggtgcagaagctgggtggcctgcatttccccaaggatcagcctcagcacaca
gtggctgctgacaattccctgagtgccagccacatggagctgactgtgaagctgctccgg
agccgcctgcagtcccgcctggccctgcacaagcagtttgcatccctcgagcacggtgtt
gtgccggtgtccagcgagtgccagcagctcttcccaaccaaaatcgtctcacgcctggtg
aagtggactgccattccctttgaggattatgctgagctgccctacactaaggatgtgata
gaggctggcttggctgaagacactcacctctactacatggccctgatagagaggggaaca
gccaagctgcaggcggccgtggtgctgaaccccgggtattccacgctgcctcccatcttc
agcctgtgcctgaactggaagggagagcgcaacagcagcaacgatgacaacattcgggcc
atggagagcgaagtcaatgtctactacaaggagctgtgggggcccaaacccggctaccag
ctgctcaccaaccagctgcagcgcctgtgcatggtgctggacgtgtacctggagacagag
ccccatgatcccagcgtggaagggcccaaggaattcccccaggagaagatgtgtctgcgc
ctggtcaggggtcccctgcgcttgaaacccttcaagttcaactatccccaggggttcttc
agccatcgctga
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integrated database retrieval system
