Anomalospiza imberbis (cuckoo-finch): 137485054
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Entry
137485054 CDS
T11605
Symbol
NTN1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137485054 (NTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aib00536
]
137485054 (NTN1)
Glycosaminoglycan binding proteins [BR:
aib00536
]
Heparan sulfate / Heparin
Axon guidance molecules
137485054 (NTN1)
SSDB
Ortholog
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Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
137485054
NCBI-ProteinID:
XP_068065382
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Position
19:4017931..4099496
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AA seq
606 aa
AA seq
DB search
MPRRGAEAPLALLLAAAWLAQPLRGGYHGVNMFAVQTAQPDPCYDEHGLPRRCIPDFVNS
AFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRTCHLCNASDPKRAHPPSFLTDLNNPHNLT
CWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIHKSMDYGKTWVPFQFYS
TQCRKMYNKPSRAAITKQNEQEAVCTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVL
QDWVTATDIRVTFSRLHTFGDESEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDR
DDSLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELFK
LSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLSKPISHRKACKECDCHPVGAAGQTCNQ
TTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPAAPPTTAASSAEEPADCDSYCKA
SKGKLKINMKKYCKKDYAVQIHILKAEKNADWWKFTVNIISVYKQGSNRIRRGDQTLWIH
SKDIACKCPKIKPMKKYLLLGNNEDSPDQSGIIADKTSLVIQWRDTWARRLRKFQQREKK
GKCKKA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaggggagcggaggcgccgctggccctgctgctggcggcggcgtggctggcg
cagcccctgcgcggcggctaccacggcgtgaacatgttcgccgtgcagaccgcccagccc
gacccctgctacgacgagcacgggctgccccgccgctgcatccccgacttcgtcaactcg
gccttcgggaaggaggtgaaggtgtccagcacctgcgggaagccgccgtcgcggtactgc
gtggtgacggagaagggcgaggagcaggtccgcacctgccacctctgcaacgcctccgac
cccaagcgcgcccacccgccctccttcctcaccgacctcaacaacccgcacaacctgacc
tgctggcagtccgacagctacgtccagtatccccacaacgtcaccctcaccctgtccctc
ggcaagaaattcgaggtgacctacgtcagcctgcagttctgctcgccgcgccccgagtcc
atggccatccacaagtccatggactacggcaagacctgggtgcctttccagttctactcc
acgcagtgccgcaagatgtacaacaagccgagccgcgccgccatcacgaagcagaacgag
caggaggcggtgtgcaccgactcgcacaccgacgtgcggcccctctccggcggcctcatc
gccttcagcaccctggacggccgccccaccgcccacgacttcgacaactcgcccgtgctg
caggactgggtgacggccaccgacatcagggtgaccttcagccgcctgcacaccttcggc
gacgagagcgaggacgactccgagctggcccgcgactcctacttctacgccgtgtccgac
ctgcaggtcggcgggcgctgcaagtgcaacggacacgcgtcgcgctgcgtccgggaccgc
gacgacagcttggtgtgcgactgcaagcacaacacggccggccccgagtgcgaccgctgc
aagcccttccactacgaccggccctggcagcgagcgacggcccgggaggccaacgagtgc
gtggcctgcaactgcaacctgcacgcgcggcgctgccgcttcaacatggagctgttcaag
ctgtcggggcgcaagagcggcggcgtgtgcctcaactgccggcacaacacggcgggcagg
cactgccactactgcaaggagggcttctaccgcgacctcagcaagcccatctcccaccgc
aaggcctgcaaagagtgcgactgtcaccccgtgggtgccgccggccagacctgcaaccag
accacgggccagtgtccctgcaaggacggtgtcaccggcatcacctgcaaccgctgcgcc
aagggctaccagcagagccgctcccccatcgccccctgcataaagatcccggctgctccg
cccaccacggccgccagcagcgcggaggagcccgcagattgtgactcgtactgcaaagcc
tccaaggggaagctgaagatcaacatgaagaagtactgtaagaaagactatgctgtccag
atccacatcctgaaagcagaaaagaacgcggactggtggaagttcacggtgaacatcatc
tccgtctacaaacaaggcagcaaccggatccggcgcggagaccagaccctgtggatccac
tccaaggacattgcctgcaagtgccccaaaatcaagcccatgaagaagtatttgctgctg
ggcaacaacgaggactctcccgaccagagcggcatcattgcggacaaaaccagcctggtg
atccagtggcgggacacgtgggcccggcggctccggaagttccagcagcgggagaagaag
ggcaagtgtaagaaagcctaa
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