Anomalospiza imberbis (cuckoo-finch): 137485200
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Entry
137485200 CDS
T11605
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04020
Calcium signaling pathway
aib04080
Neuroactive ligand-receptor interaction
aib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
137485200 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137485200 (GRIN2C)
04082 Neuroactive ligand signaling
137485200 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aib04040
]
137485200 (GRIN2C)
Ion channels [BR:
aib04040
]
Ligand-gated channels
Glutamate (ionotropic)
137485200 (GRIN2C)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
137485200
NCBI-ProteinID:
XP_068065654
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All DBs
Position
19:8722450..8741287
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AA seq
1333 aa
AA seq
DB search
MGRAPAHALLLSMVLGCSAAFTDILLPGAEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPLEIHPITVVVNNTNPSTLLTQICNILASHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVITFEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYIWIVPSMTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWTPTRATATNTSFYRHLLNVTWEHRDFSFNEGGYLVKPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPSF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQTLSSPGRAPTPDVTASSAQANVLKML
QAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRGPPSGP
HPAERLGRTYAPKGAPLGLPLPQPIPVDSRLHGEENWRGENQHPHLLHPLKFRGGCVGDE
ALTGFPHLLVKTSPGGDYGEQMLVGNHVGAPLPPPTSPRDLPPPDIYREHKRPSGRGDRL
QNNPLLQRDGAHGGSGSLPRLLSAAEKKREAGSAFLPPSCSRGAFPKVTRTCRARGEPAW
PEAAAMEREKLSRWASSARAPGERGEKRRPAGLRRCGAPRLAARADVPDLFPEAEAGYGC
GSRCPQAAGRLPPRSPVTRLPSYREACRQNPRGTFTVPACAPHACVNSYANLPLYARHLS
RGSAPSREHPGVHPCDRGSGRWDSACRDCGRRGELALLRAVGAERRDPLVARGVASPCAG
GSWRRVSSLESEV
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcgcacgctctgctactgtcgatggtgctgggctgctcggctgcc
ttcacggacatcctgctgccgggtgctgaggagccggtggtcaacgtggctgtggtgttt
gggggcacgtcctaccccctgcacatccgctcccgcctgagcccccagagcttcctggac
atgcccctggagatccaccccatcactgttgtcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcaacatccttgccagccacaagatccacggcatcgtttttgaagac
aacgtgggcacggaggccgtggcccagatccttgacttcatctcctcccagacccaggtc
cccatcatcagcatcagtggtgggtctgcagtggtcctgaccccaaaggagcctggatca
gctttcctgcagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgctgtcatcaccagcctctacccaggctacaacatc
ttcctggatgtcatccgctccttcacggatgccagctactttggttgggagctgcaagag
gtgatcacctttgagatgagccaggagcagagtagctccaggacgcagcggctcttgcgc
cagattgatgcccaggtcctcattgtttactgctcccgagaggaggccgagtatctcttc
tccatggcagaacaagccgggcttgtggggccaggatacatctggattgtgcccagcatg
acagtgggcaacatggaggtgccaccctcctccttcccagtcggcctcatcagcgtggtg
acggagagctggaagctgagcctgcggcagaaggtgcgggatggcgtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtggggcgggactgc
tggacccccaccagggccactgccaccaacacaagcttctaccggcaccttctcaatgtg
acatgggagcacagggacttctccttcaatgaaggtggctacttggtcaagcccaccatg
gtggtgatcacactcaaccagcaccggctctgggagatggtgggcaagtgggagaaaggc
atcatccacatgaaatacccggtgtggccccgctacggctccttcatgcagcccgtggtc
gacaaccgccacctgacagtggccaccctggaggagagacccttcgtcattgtggagaac
acggaccccagcacgggggtctgcgtgcgcaacaccgtgccctgccgcaagcagaccaac
tcctcccagagtggtgatggccttgtggatccctacactaagctgtgctgcaaaggtttc
tgcatcgacatcctgaagaagctggccaaggcagtgaagttctcctacgacctctacctg
gtgaccaatggcaaacacggcaagatcgtccgtggggtctggaatggcatgattggtgag
gtgtactacaagcgtgcagacatggccatcggctccctcaccatcaatgaggagcggtcc
gagattgtggatttctccgtaccctttgtggagacaggcatcagcgtcatggtggcccgg
agcaacggcaccgtgtccccctccgctttcctggaaccttacagcccagctgtgtgggtc
atgatgtttgtcatgtgcctcactgtggtggccatcaccgtctttgtgttcgagtatttc
agccctgttggctacaaccagaatctcaccagtggcaagaggccgggaggtccctccttc
accatcggcaagtccgtgtggttgctgtgggctctggtcttcaacaactcagtccccatt
gagaaccccaagggcaccaccagcaagatcatggtgctcatctgggccttcttcgctgtc
atcttccttgccagctacacagccaacctggctgccttcatgatccaggagcagtacatt
gacactgtgtcggggctgagtgacaggaagttccagaggccacaggagcagtatccaccc
ttccgctttggcactgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtgaagtacaaccagcgctctgtggaggacgccctcaccagc
ctcaaaatggggaagctggatgccttcatctacgatgcggcggtgctcaactacatggca
ggcaaggacgagggctgcaagctggtgaccatcggcagtgggaaggtgtttgccaccacg
ggctatggcattgccctgcagaaggactcgcgctggaaacgagccattgacttggccctg
ctccagttcctgggagacggtgagacccagaagctggagacagtttggctgtcagggatc
tgccagaatgagaagaatgaggtgatgagcagcaagctggacattgacaacatggctggg
gttttctacatgctgctggtggccatggggctgagcctgctggtcttcgcttgggagcac
ctcgtctactggaagctgcgtcattccgtcccgaagtcccacaagcttgacttcctcctg
gccatcagcaggggcatctacagctgcttcaatggggtgcagaccctatcgagccccggg
cgggcacccacacccgatgtcactgccagctcagcccaggccaatgtgctgaaaatgctg
caggcggccaaagagatggtgacaacggccagcgtgggcggctcactggagcaggccacc
cgcaccattgaggactggagcaaccacagcgagcgcctccagaccaccttctccctgagg
acacctcagctcgtggtgcagaacagcaccggcgcacaccgggggcccccctccggccca
caccctgccgagaggctggggagaacctacgctcccaagggtgctcccctggggctgccg
ctgccccagcccatccccgtggactcccgtctgcacggagaggagaactggagaggggaa
aaccagcacccccacctgctacaccccctgaagtttcggggtggctgtgtaggggatgaa
gccctcacaggtttcccccacctcctggtgaagacttccccaggaggggattatggggag
cagatgctggtggggaaccatgtcggcgctcccctcccgccccccacatcccccagggac
ctcccaccaccggacatctacagggagcacaagcggccgtcgggacggggggaccggctg
caaaacaaccccttgctccagagggacggggcacacgggggctcagggtctctgccccgg
ctgctctcggcagcggagaagaagcgagaggcgggcagcgccttcctgcctccatcctgc
tctcgcggagccttcccgaaagtcaccaggacttgcagagccaggggcgagccggcgtgg
ccggaggcggcggcgatggagcgggagaagctgagtcggtgggcgagctcggccagggcg
cccggggagcgcggcgagaagcggcgacccgcggggctgcggcgctgcggggccccgcgc
ctggctgcccgcgccgatgtgcccgacctcttccccgaagccgaggccggctacggctgc
ggctcccgctgcccgcaggccgctggccggctgccaccgcgctcgcccgtgaccaggctg
ccgtcctaccgggaggcttgccggcaaaaccctcgtggcaccttcaccgtgccggcgtgc
gctccccacgcctgcgtgaactcctacgccaacctgcccctctacgcgagacacctctcg
cggggctccgcgccgtcccgggagcaccccggggtgcacccctgtgatcgggggtccggg
cgctgggacagcgcctgcagagactgtgggaggcgcggggagctggccttgctgcgggcg
gtgggggcggagaggagggacccactggtggcccgaggggtggcgagtccctgcgccggc
gggtcctggcggcgggtctccagcctggagtcggaggtgtga
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