Anomalospiza imberbis (cuckoo-finch): 137485369
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Entry
137485369 CDS
T11605
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03013
Nucleocytoplasmic transport
aib03015
mRNA surveillance pathway
aib03040
Spliceosome
aib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137485369 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
137485369 (ALYREF)
03015 mRNA surveillance pathway
137485369 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137485369 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137485369 (ALYREF)
03041 Spliceosome [BR:
aib03041
]
137485369 (ALYREF)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137485369 (ALYREF)
TREX complex
137485369 (ALYREF)
Spliceosome [BR:
aib03041
]
Complex C
Other components
EJC/TREX
137485369 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137485369 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
137485369
NCBI-ProteinID:
XP_068065938
LinkDB
All DBs
Position
19:322855..327065
Genome browser
AA seq
254 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGASRGGRGGRGRGGTTRGGGPGRGGVGGGRAGGGPVRNRP
VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQ
ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS
QIDTQRRPAQSVNRGGMTRNRGVSGGFGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEEL
DAQLDAYNARMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaagctcaaccggagccagcgt
ggggccagccggggcggccggggtggccggggccggggcggcaccacacgcgggggcggg
cccggccggggcggcgttggcggcgggcgcgcgggcggcggccccgtgcggaaccggccg
gtgatggcccggggcggcggcaggaaccggcccgcgccctacagccggcccaagcaactc
cccgagaagtggcagcacgacctgttcgacagcggcttcggggcgggggccggcgtggag
accggcgggaagctgctcgtctccaacctggacttcggcgtttcggatgcggacatccag
gagctttttgcggagtttgggaccttgaagaaggcagctgtgcactatgacagatccggc
cgcagcctggggacggcagacgtgcatttcgagaggaaggccgacgcgctgaaggccatg
aagcagtacaacggggtgcccttggacgggcgccccatgaacatccagctggtgacatca
cagatcgacacgcagcggagaccagcacagagtgtaaacagaggaggcatgaccagaaac
cgcggggtctcagggggatttggaggtggaggcaacaggcgagggactcgtggtgggaac
agagggagaggcagaggagctggaagaacttccaaacagcagctctctgcagaagaacta
gatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
