Anomalospiza imberbis (cuckoo-finch): 137485372
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Entry
137485372 CDS
T11605
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
137485372 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aib02000
]
137485372 (TMC6)
03037 Cilium and associated proteins [BR:
aib03037
]
137485372 (TMC6)
Transporters [BR:
aib02000
]
Other transporters
Pores ion channels [TC:
1
]
137485372 (TMC6)
Cilium and associated proteins [BR:
aib03037
]
Other cilia and associated proteins
Stereociliary proteins
137485372 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
MiaB_C
Motif
Other DBs
NCBI-GeneID:
137485372
NCBI-ProteinID:
XP_068065941
LinkDB
All DBs
Position
19:complement(392528..399286)
Genome browser
AA seq
799 aa
AA seq
DB search
MSQPPSITLHVPEGSESDGQEPSPDNERALHTSFHQLIMEQSSLIEAGLELELQERGRES
PARLAVPDACAMAWPEPGQGEEHPSYSSASLQILASMPSRTIGRNLGAIISQYCNRTARL
RRRSGRPPLQQLCRTARPSLRQYDLETDPTRATLEEKRRLLVKELLSLSPSQCSHMLLTM
PLSLAEKRILRRQLSGQRGPVRQHAHHWAPFSPCGWSKVCVGLGCRGLWYRLLSLLRTAQ
PGHYALKQIGGRFGSSVLSYFLFLKTLLMLNFFSFLILLAFVVVLQAVYPTASVSPQPFT
GLELLTGAGYFTHSLLYYGYYSNVTLNDPCTSSPEGSVCPLAAPLLPYNLPLAYLFSVGV
SFLVTCILLVYSVSRSFRESVGSSTGDLAIKVFCAWDFKVIQRRSVKLQCENICTQLKEV
LGEQRSRSHSQSRCQCLGHCVVMLLAWALALGSVLGCVLAVHYFSEHMHMVQQEQQARGS
GRWQQEAILLVLPLVVSLLNALMPHLYNLLAVWEKQDSPVTQVYVAITRNLILKMVILIL
LCYHWVSRSVICSTEECWETCVGQDLYRFMVMDFIFTLLDTLFGELIWRLILEKRLKTKQ
RPEFDIARNVLELIYGQTLTWLGVLFAPLLPAVQMLKLLLLFYIKKTSLMQNCQSPSKPW
QASRMSTVFITLLCFPSFLGAAAFLSYTIWSVQPSETCGPFRGLETIYKSGKRWVLVLEK
SNPNITWFAWVYQHLLENTSPLFFMSVALIAVIYFNIQVVRGHQRVICLLQEQIANEGED
KAFLIQKLHSVYKQRHRRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgccctccatcaccctccacgtccccgagggctccgagagcgatggccag
gagcccagtccggacaacgagagagccctgcacacctcattccaccagctcatcatggag
cagagcagcttgatcgaggcaggtctggagctggagttgcaggagagaggcagagagtcc
ccagcccgcttagctgttccagatgcctgtgccatggcctggccagagcccgggcaaggt
gaggagcaccccagctactcctctgcctccctgcagatcttggccagcatgcccagccgc
acgatcggacgcaacctcggggccatcatctcccagtactgcaaccgcacggcgcggctg
cggcgccggagcggccgcccaccgctgcagcagctctgccgcacggcacggcccagcctg
cgccagtatgacctggagactgacccaaccagggccacactggaagagaaacggcgcctg
ctggtgaaggagctgctgagcctctcacccagccagtgcagccacatgctgctcaccatg
cccctcagcctggcggagaagcgcatcctccggcggcagctgagtgggcagaggggccca
gtgaggcagcacgcccaccactgggcccccttctcaccctgtggttggtccaaggtctgc
gtcggcctcggctgccgaggtctctggtacaggctcctctccctgctccgcactgcccag
cccgggcactatgccctgaagcagattggtggccgctttggctccagtgtcctgtcctac
ttcctcttcctcaagacactccttatgttgaacttcttttcattcctcatcctcctggcc
ttcgtggtggtcctgcaggccgtgtaccccactgcatcagtcagcccccagcccttcact
ggcctcgagctcctcacaggagcgggctacttcacacactcgctgctgtactacggctac
tacagcaatgtcaccctgaatgacccctgcacctccagtcctgagggcagcgtgtgcccc
ctcgcagcccccctgctcccgtacaacttgccactggcctacctgttcagtgttggggtc
tccttccttgtcacctgcatcctgctggtgtacagtgtgtcccgctcttttcgggagagt
gtgggaagctccacaggggacttggccatcaaagtcttctgtgcctgggacttcaaggtg
atccagaggcgctcggtgaagctgcagtgcgagaacatctgcacccagttgaaggaggtg
ctgggggagcagcgctcccgctcccactcgcagagccgctgccagtgcctggggcactgt
gttgtaatgctgctggcctgggcactggccctgggctcggtgttgggctgcgtgttggct
gtacactacttctcagagcacatgcacatggttcagcaggagcaacaagcacggggcagt
ggcagatggcagcaagaagccattctgctagtcctgccccttgtggtgtccctcctcaat
gccttgatgccgcacctgtacaacttgctggcagtgtgggagaagcaggactccccagtg
acacaggtctacgtggcaatcaccaggaacctcatcctgaagatggtgattctcatcctg
ctgtgctaccactgggtcagccggagcgttatctgctcgacagaggagtgctgggagaca
tgtgtggggcaggacctgtatcgcttcatggtgatggatttcatattcaccttgctggat
acgctcttcggggagctgatctggaggctaattctggagaagaggctgaagacaaagcag
aggccagagtttgatatcgcccgaaatgtgctggagctgatctatgggcagaccctgacc
tggctgggcgttctctttgctccgctcctgccagctgtgcagatgctgaagctgctgctg
ctgttctatatcaaaaagaccagcctgatgcagaactgccagtcccccagcaagccctgg
caagcatcacgcatgagcactgtgttcatcactctgctgtgcttcccctccttcctgggt
gcagctgccttcctctcctacaccatctggtcggtgcagccatcagaaacctgtggtccc
ttccgggggctggaaacaatctacaagtcagggaagaggtgggtgctagtgctggagaag
tccaaccccaacatcacctggttcgcctgggtctaccagcacctgttggagaacacaagc
cccctgttcttcatgtctgtggccctgatagctgtgatctacttcaacatccaggtggta
agaggccaccagagggtcatctgcctgctccaggagcagattgccaatgaaggggaagat
aaggcatttctcattcagaagcttcactccgtttacaagcaaagacacaggcgctcctga
DBGET
integrated database retrieval system
