Anomalospiza imberbis (cuckoo-finch): 137485764
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Entry
137485764 CDS
T11605
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aib03021
]
137485764 (SUPT6H)
03036 Chromosome and associated proteins [BR:
aib03036
]
137485764 (SUPT6H)
Transcription machinery [BR:
aib03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137485764 (SUPT6H)
Chromosome and associated proteins [BR:
aib03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
137485764 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
137485764
NCBI-ProteinID:
XP_068066537
LinkDB
All DBs
Position
20:6894797..6921459
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQAQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQ
EKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagcgaagcagaggagtcagaggaggagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgatcaggatgagcaggggaacctgaaaggattcattaatgat
gatgatgatgaggaagaagaggaggaagccagtgactctggagactccgaggatgatgtc
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggatgatgaagcagaagattatggaaaggaagaacatgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaagaggaagaggaggaggaggaagatgaatctgacattgatgat
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggactttgactac
gatgagtttgagaagtacaacgagtacgatgaggagatggaggaggagtacgagtacgag
gatgaggaaacggaaggggagacccgcgtgcggcccaaaaagaccaccaagaaacgcgtc
agtcgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcaca
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttataggaat
gcatttgcaacacccaccatctccttgcaggaaagttctgactaccttgaccgtggacaa
gccagcagcttcagccgcaaggggcccagcaccatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccgttcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgactcgactgtttgagaagatgcaggcttaccag
tatgagcaaatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggatgtgcagtccatggatgagctgaaggacgtgtac
aatcacttcctgctgtactatggcagagacatccccaagatgcagaatgctgccaaggct
gctcgcaaaaagcaaaagcgtatccgagaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagacagagcagttccct
gcagagcccctggagctggccaaggactatgtgtgtagtcaattcccaagcccggaagca
gtgctggaaggagctcggtacatggtggctttgcagatcgccagggagcccttggtcaga
caggtcctgagacagactttccaagaacgagctaaaatcaacatttcaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccagttcctgaaaatgagcctggcagaggatgaggcg
ttgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acgtactttgaggaaatcaagcagttctattaccgggacgagttcagtcaccaggtgcag
gagtggaatcggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattgaagaacaagctcttagtggaggccaaggagtatgtcctcaag
gcctgcagccgcaaactttacaactggctgaaggttgctgcgtacaggccagatcagcag
gtggaggaagacgatgatttcatggatgagaaccaagggaaggggatccgcgtgctgggc
attgccttttcatcagccagggaccaccctgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgactgccacatttcacaaagagaaggaatgcctggcgtgag
gaggagagggaaaagaaggcccaggatattgaaacattgaaaaaattcctcctgaacaag
aagcctcatgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggat
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctctatcggagtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgtcaggccgtgtccctcgctcgccgcatccaggacccc
ctcatagagtttgcccaagtctgcagctcagatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctttgctgcagtacgtgtgtggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcctagatggttctagggtccatcctgaaacctat
gaatgggccaggaaaatggcagtggatgccctggaatacgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccctgagcgcctgaaagacctggat
cttgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgttct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactgggattgcccacagacgcccacagggagagagc
tacgaccaggccatacggaatgatgaaactggcctttggcagtgcccgttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaaaaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagattgacattgagaaattcagtgcagacctgacctgcaggacc
tcagacctgatggacaagaacaatgagtggaaactgcccaaagacacctactacgacttc
gactctgaggcagcagatcacaaacaggaagaagacatgaaaagaaagcagcagaggaca
acgtacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgattattcggccgagcagcaaaggg
gagaaccatctgactgtcacctggaaggtcaacgatggcatttaccagcatgtggatgtc
cgggaggagggaaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccatactttattagt
gcctgtaaagacctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtattacc
cccagcagcagcagtcggaccaggactccagcctccattaatgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaatgccctaccacagaacatgacctcccagatg
ttcagtgccattgctgctgtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagtatggctatggaggcagcggaggcggcagcagcgcgtaccacgtg
ttcacgactccagcacagcagccggtggccacccctctgatgacccccagctactcctac
actactcccagccagcccatcaccacgccccagtaccagctccaggccaacaccacaccc
cagtccacccagtcccaggcacagtcacagccatcatccagctccaggcagaggcagcag
ccaaagaccaacagccacgctgccatcgactggggcaagatggccgagcagtggctgcag
gagaaggaggctgagcggaggaaacagaagcagaggttgacccctcgcccctctcccagc
cccatgatcgagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgag
atggatcgatag
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integrated database retrieval system
