Anomalospiza imberbis (cuckoo-finch): 137485879
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Entry
137485879 CDS
T11605
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04142
Lysosome biogenesis
aib04144
Endocytosis
aib05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137485879 (CLTC)
04142 Lysosome biogenesis
137485879 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
137485879 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137485879 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aib04147
]
137485879 (CLTC)
Membrane trafficking [BR:
aib04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
137485879 (CLTC)
Exosome [BR:
aib04147
]
Exosomal proteins
Proteins found in most exosomes
137485879 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
NEW1_HB
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
137485879
NCBI-ProteinID:
XP_068066743
LinkDB
All DBs
Position
20:8630030..8659606
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcatc
agagagaaagtaggagagcaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccggagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgctgcaaatcttcaacattgagatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttttggaagtggatctctctgaacactgttgcc
ctcgtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgctggctgccagatcatcaactacagaactgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtcgtgggagca
atgcagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtatggc
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctctcagtgtgtgtggaagaggagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcaggggcc
gaggagctctttgccaggaaattcaatgcactctttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtggatcctacactagcacttagtgtctatctg
agagccaacgttccaaacaaggtcatccagtgttttgctgaaacaggacaagttcagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatacaatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactcgagcacttcacagacctgtacgacatcaagcgcgcggta
gttcacactcacctcctcaaccctgagtggttagtgaattattttgggtccttatcagta
gaagactctctggagtgtctgcgtgcgatgctgtccgctaacatccgtcagaacctgcag
atctgtgtccaggtagcttccaaataccatgaacagctgtcaacacagtcactcattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatcccgaacgtgttaaa
aacttcctcaaggaagctaaactcactgaccagctgcctctcatcattgtgtgtgaccgc
tttgactttgtccacgacttggtgctgtatttgtatagaaataatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgtctgccagttgttattgggggactgctt
gatgtggattgctctgaagatgtgatcaagaacctcatccttgtagtgagaggtcaattt
tcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaagctgcttctgccc
tggctggaagcaagaattcatgagggctgtgaggagcctgccactcacaatgcactggcc
aagatatacattgacagcaacaacaacccagagagattcctgcgtgagaatccctactat
gacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctggcctgcgtggct
tacgagcgtggacagtgcgatctggagctgattaatgtgtgcaatgagaactccctcttc
aagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgggccagtgtgcta
ctggaaagcaacccctacagaagacccctgattgaccaggttgtccagactgcactgtca
gagacccaggaccccgaggaagtctctgtcactgtgaaggccttcatgactgcagatctt
cccaatgagctcattgaactgctggagaaaatagttctggataattcagtgttcagtgag
cacaggaatctgcagaaccttctcatccttacagctatcaaggctgaccgcacccgtgtc
atggagtacatcaatcgcctggataactacgatgcccctgacatagccaatattgctatc
agcaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtacgagttcgccgag
cgctgcaacgagcctgcagtgtggagccagctggccaaagcacagctccagaaggggatg
gtaaaggaagcaattgactcctacattaaagcagatgatccttcctcatacatggaagtt
gttcaagctgctaatgccagtggaaactgggaagaactggtgaagtatctgcagatggca
cgcaagaaggcccgggagtcgtatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgcctggcagagctagaggagttcatcaatggccccaacaatgcacatatccagcag
gttggtgatcgctgctatgatgagaagatgtatgaagcagccaagctcttgtacaacaac
gtgtccaacttcggccgtttggcctcaaccttggtgcacctcggcgagtaccaggcagcc
gtggatggtgctcggaaagccaacagcactcgcacgtggaaagaggtctgttttgcttgt
gtggatggaaaagaattccgcttggctcagatgtgtgggctccatattgtagtgcatgca
gatgagctggaagagctaatcaactattaccaggatcgtgggtactttgaagagctgatc
actatgttggaagcagcgcttgggctggagcgagcacacatggggatgttcacagagctg
gcaattctctactccaagttcaagccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacattcccaaggttctgagagctgcagagcaagcccatctctgggctgaa
ctggtgttcctgtatgataagtatgaagagtatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaat
gtggagctgtactacaaggcagttcaattctatttggaatttaagcctctgctgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcactttcttcaca
aaggttaaacagctgcccctggttaagccttacctgcgctctgttcaaaatcacaacaac
aaatcagtcaatgagtccctcaacaacctcttcattattgaagaagattaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgcccaacgtttggag
aaacacgagctaatagagttccgaaggatcgctgcctatctcttcaaaggcaacaaccgc
tggaaacagagcgtggagctctgtaagaaggacaggctctacaaggatgccatgcagtac
gcttccgaatccaaagatactgagctggcagaagagctgctgcagtggttcttgcaggag
aacaagagggaatgctttggcgcttgtctcttcacctgctacgatctcctaaggccggat
gttgtcttggaaacagcgtggaggcacaacattatggactttgccatgccatactttatt
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggacaaactg
gatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacacaacctattgtt
tatggccagccccagctgatgctgacagcgggacccagcgtggcggttcctccgcaggca
cctttcggctacggctacacggcccctccgtacgggcagccgcagcccggcttcggctac
agcatgtga
DBGET
integrated database retrieval system
