Anomalospiza imberbis (cuckoo-finch): 137485885
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Entry
137485885 CDS
T11605
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
aib
Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aib03021
]
137485885 (MED13)
Transcription machinery [BR:
aib03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
137485885 (MED13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
137485885
NCBI-ProteinID:
XP_068066756
LinkDB
All DBs
Position
20:8789558..8842661
Genome browser
AA seq
2179 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSSVGAPH
CSTACLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCEEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGPQQPAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMAAPDSQVRFANIRTADGAKPPQLHGAELANSPQPPPLSPHP
CDGADEGVPKAPSTPQSQHFYQMPTPDPLVPTKAMEDRLDGLSQPFPAAFPEVIEPTMYV
GTAVNLEEDEADTTWKYYKVPKKKDVEFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQYLTAVATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIE
REVGKKHKAEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRLAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGTDDKSNCKEAKTGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSTVGAQFRIEVDEGFCSPKPAEIKD
FSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPPGPAMP
FIKDGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSIEHGSGGLKEPEKLPDDLILLLQDQCTN
LFSPFGAADQDSIAKTGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNDAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPSSQAASALPPVTAP
AANPNTPSSAPAAPTSSAITVTSSSAMSSAATTANSTLTTTAPSSSSASLGSGIPTSKPS
SFPPFSNMNNTTPASLPAQAAPVPNGQTGGQQQQPTLQTAGMSGDTAAAPAQPHPEVSES
TMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQ
VLPPHIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTL
TGFGPGLAMETALRSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYC
LSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSS
LPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLV
AMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASST
YTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPGGSPVHSPGSHYPHGG
DMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLF
LKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSC
LPVHFVVLNQLYNFIMNML
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctaactgggattaaatggaagcgctacgtgtggcagggcccaacatct
gcccccatcctgttcccggtcacggaggaggatcccatcctgagcagcttcagccgctgc
ctcaaggccgacgtgctcagcgtctggcgccgggaccagaggcctgggcgcagggagctc
tggatattctggtggggggatgaccccaactttgctgacctgatccatcatgatctctca
gaagaggaagatggggtttgggagaacgggctgtcctacgagtgccgcactctgctgttc
aaagctgttcacaacctgctggagaggtgtctgatgaacaggaacttcgtgcgcatcggc
aaatggttcgtgaagccttacgagaaggatgagaaacccatcaacaagagtgagcacctg
tcctgctcgttcaccttcttcctgcatggggacagcaacgtgtgcaccagcgtggagatc
agccagcaccagcccgtgtacctgctcagtgaggagcacctcaccctggcccagcagtcc
aacagccccttccaagttatcctgagcccctttgggttgaatggcacactcacagggcag
tccttcaagctttctgattcatccacaaaaaagctcattggggagtggaagcaattctac
cccgtcacatccaacttgaaggagggatctgaggaaaaacaagaagaaatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgaggatggtgtacccggcg
tgcttcgtgctggtccctcagacagacatccctgctcccagctccgtgggggctccccac
tgctccactgcctgcctgggggtccaccaagtgcctgcttccaccagagaccctgccatg
tcctcggtcaccctgacaccacccacgtccccagaggaagttcagacagttgatgctcaa
tctgcccagaaatgggtgaagttttcctcggtttcggatggatttatctcggacagtacc
agccatcatggtggcaaaatccccagaaaactggccaaccaagtggtggacagagtctgg
caagagtgcaacatgaacagagcacagaacaagaggaagtattctgctacatcaaatggc
ttgtgtgaggaggagacagctgacaaggtggcatcctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggccccacctgtgggcccccagcagccggcggctccgaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagtgatgatgttgccatggaggcagattcagcgagtcagaggcttgtgatggct
gcaccagacagccaagtgaggtttgccaatatccgaactgccgacggagcgaagcccccg
cagctgcacggggccgagctggcaaactctccgcagccgccgccgctcagcccccacccc
tgcgacggcgccgacgagggggtgcccaaagctccctccacgccccagagtcaacatttc
taccagatgccaacgccagaccccttggtccccacaaaagcaatggaagacaggctcgat
ggcctgtcccagcctttcccagccgcgttccccgaggttatagagcccaccatgtacgtc
ggcactgccgtcaatttggaggaggatgaagctgacacgacttggaagtattataaagtt
ccaaagaaaaaggatgtggagttcttaccaccccagcttccaaatgataagttgagagat
gatccagtcatacctgctggacaggaaaatgtaacatcagttacagaattaatggtgcaa
tgtaggaaacctttgaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
tatttaacagctgtagcaacggaagctgaccaggaacctgaaattgatccttatgccttt
gtggatggagatgtggaattcctatttcctgacagtaaaaaggacaggcagaacattgag
agggaagtggggaagaaacacaaggctgaggatgggacatccagcgttacagttctgtcc
catgaaggagaggatgcaatgtctctgtttagtccttctgtcaagcaagatgcccagcgc
ttggctgcccacgcccgcactgcctcgaccagcctgttccacgagacagacctggtggtg
tcctacactgacctggacaatctcttcaattctgatgaagatgaactcacacctggatca
aaacgaacagtgaacggcactgatgacaaatccaactgcaaagaggcaaaaacaggaaat
ctagacccactgtcatgcataagcactgcagatctccataaaatgtatccaactccccct
tcactggaacaacatattatggggttttctccaatgaacatgaacaacaaggagtatggc
agcatggacactacacttggaggaacagtgctggaagggaatagctctactgtgggagct
cagttcagaatcgaagtagacgagggtttctgcagccccaaacctgctgaaatcaaggat
ttttcttacgtttataaacctgagaactgtcaagctttagtgggctgttccatgtttgca
ccactgaagactcttcccagccagtgtcttcctcccatcaaactgcccgaggaatgcatt
taccgccagagctggactgtgggaaagctggatctgcttcctccaggccctgccatgcct
ttcatcaaagatggtgatgggagcaccatggaccaggagtacggccctgcctacaccccc
cagacccacactccgtttgggatgcccccgagcagtgcccctcccagcaacggcggggct
ggaatcctcccttctccttccacccctcgcttcccaactcccagaacaccaaggactccc
cgcacgccccgcggagccggcgggcctgcgagcgcccagggctcagtgaaatacgagaac
tcagatttgtactccccagcttccaccccctccacgtgtcggccgctgaactcggtggag
cccgcgacggtgccttccatccccgaggcacacagcctgtatgtgaatctcatcctctcc
gagtccgtcatgaatctcttcaaagactgcaacttcgacagctgctgcatttgtgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcctgatccaacacaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttcc
gggctgtttcttgaagatgagttggatattctggggcgaaacacggagtgcggcaaagaa
gcggaaaaacgctttgaagctctcagagctacttccattgaacacggcagtggagggctg
aaagaacccgagaaactgcccgatgacttgatactgttgctgcaggatcaatgcaccaac
ctgttctcacccttcggagcagcagaccaagactccatagccaaaactggtgctgtcagc
aacctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgtggtggatgtgagcatgcagtgttcccag
gacatcctgcgcatgctgctctcgctgcagcccgtgctgcaggacgccatccagaagaag
cgaacggtccggtcctggggcgtgcagggacccctcacgtggcagcagttccacaaaatg
gctgggagaggctcctacggaactgatgagtccccagaaccactgccaatcccaacattt
ttgttgggatacgattacgatttcctggtgctgtctccatttgcattgccctactgggag
aggctgatgctggaaccttacggatctcagcgagacgttgcctacgttgtggtgtgcccg
gagaacgaggctctgctcaacggagccaaaagcttctttagggatctgactgcaatatac
gagtcctgcaggcttggtcagcacagaccaatctgtaagttactgcctgatgggatcatg
agggttggccctacagcctccaagaagctctcagagaagttggtcacagagtggttctca
cagacagccaatgccaacaacgatgcgttctccaaactcaaactctatgctcaagtttgc
agatatgagctgggtccttatcttgcttctcagcctttggacaattctctactttcccaa
acaaacctggtccctccctccagccaggcagcctctgctctgcccccagtgacagcccct
gctgccaatcccaacactccgtcatcggctcccgcagctcccaccagcagcgccatcaca
gtgacctccagcagtgccatgtcctctgcagccactacagccaactccaccctgaccacc
actgccccgtcctcctcctctgccagcctgggcagtggcattccaacgagcaagccttcc
tcgttcccacctttcagcaatatgaacaataccactcctgcctccctgcccgcccaggct
gcaccagtcccaaatgggcaaactggggggcagcagcagcagccaacactgcaaacagca
gggatgtctggagacacagctgcagcacctgcacagccccatccagaggtttctgaaagc
actatggatcgtgataaagtcggagtccccacagatggagattcacatgctatcacctat
ccacctgcaattgtagtttacataattgatcctttcacatatgaaaaaaaggatgagaac
agtagctcatccagtttgtggacacttggacttctgcgctgctttctggagatggttcag
gttcttcctccccacatcaagaacatcatttctgtgcagattgtcccatgtcagtacctg
ctccagcctgtgaaacacgaggaccgtcagatttacacccagcatttaaaatctttggca
ttttcagctttcactcagtgtcggagacctctcccaacttccactaacgtgaaaacctta
actggctttggcccagggttagccatggaaactgctcttaggagccctgatagacctgag
tgtattcgactctacacccctccttttatactggctccagtaaaggacaagcaaacagag
ctgggagaaacctttggagaagctggccagaagtataatgtgctttttgtgggctactgt
ttgtctcatgatcagaggtggctgcttgcatcctgtacagacctctatggagagcagtta
gaaacctgcataattaatattgatgtaccaaacagagctcgcaggaaaaagggttctgcc
cgcagacttggtctccagaaactctgggaatggtgcttgggacttgtgcagatgagctct
ttgccatggagagttgtcataggccgcttgggaagaataggacatggggaattaaaagac
tggagctgtttgctgagccgccggaacctgcagtccctgagcaagaggctgaaggacatg
tgcaggatgtgtgggatctctgctgcagactcccccagcattctcagtgcttgcttggtg
gccatggaaccccagggatccttcattattatgccagattccgtgtccacgggctccgtg
ttcgggcgcagcaccactctgaacatgcaaacgtctcagctgaacacgccccaggacacg
tcctgcactcacatcctggtgttccccacctctgcctctgtgcaagtggcatcatccact
tacaccactgagaacctggatctggcctttaacacaaacaatgatggagcagatggaatg
ggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatattctt
cctgcatctcctggtggatcccctgtgcattctccagggtcccactacccccatggaggt
gatatgggcaagggtcaaggcacagatcgattgctttccacagaatctcacgatgaagta
acaaatatactgcagcagccactggcccttggatattttgtgtcaactgccaaagcaggt
ccattgcctgactggttttggtcagcgtgtcctcaagcacaaaatcagtgtcccttgttt
cttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagt
aaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaa
cagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgt
ctcccagttcattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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