Anomalospiza imberbis (cuckoo-finch): 137486070
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Entry
137486070 CDS
T11605
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aib04131
]
137486070 (VPS50)
Membrane trafficking [BR:
aib04131
]
Protein recycling
Others
EARP complex
137486070 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
137486070
NCBI-ProteinID:
XP_068067111
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All DBs
Position
1:complement(128550792..128629527)
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AA seq
990 aa
AA seq
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MMFSANNNLGNFQSFGKIRFHLPFNKWNLLFLLEGLRSPQESVNDLSPIENFRIPTKEEL
RELHEEPTDPQAQQEIINSIEEVYFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQ
AAVSKKVADLILEKQPAYVEELERVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGL
LANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYS
CISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHF
TQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVML
SYYRTMQWHENHDQDEAAVVSSVSDGSNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLK
VKTYLLGTDLSNFKYDDFIFVLDVISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHR
TRLEELRMFLENETWELCPVKSSFSILQLHEFKFMEQSRSPSVSPSKQPASAVSSTVTLF
EQYCAAGNPFEIQADSKDDETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDE
QTGDAPIKSVSRETLRSRKRSDYNLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFD
VIHFMSQLFDYYLYAVYTFFGRNDMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSG
TLTAAEERKEKVPSPHLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVM
PAAKKPFLQQFYSQTVSTASELRKPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNV
YVDALLKEFEEFNRRLNDVSKRVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTN
LVNICLGTYINKKARQKLLAAIDDTDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttctgcaaataacaacttagggaattttcagtcatttggaaagattaggttc
catttaccatttaataagtggaaccttttatttcttctggagggtctaagaagtcctcag
gagagtgttaatgacctcagtcctattgaaaactttcggattcctactaaggaggagctc
agagaactacatgaagaaccaactgatcctcaggcacaacaggaaataattaacagcatt
gaagaagtttatttttccaatgactcctttgatattgtgaagtatgagttagagaggctt
cctccagtacttagtcttcaagaactagaagagtacagagacaaactaaaacaacaacaa
gctgctgtatctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgag
gaacttgaacgtgttacatcgttgcagactggccttcagctagcagcagttatttgcaca
aatggaagaagacacctgaatatagcaaaggaagggttcacacaaactagtttggggctc
cttgcaaatcagaggaaacgacagttgcttattggactgctaaaatctctgagaacaata
aaaacactgcaaagaactgatgtgcgtttgagtgagatgttggaggaggaggattatcca
ggagctattcaactgtgcttggaatgccagaaagctgccagcactttcaaacactacagt
tgtataagtgagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaattg
gacgtagcactttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcag
caggcttacaggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttc
acccaagccattcacaacactgtgtttcaagtagtccttggatatgtggaactgtgtgca
ggaaacacagacaccaagtttcagaagttacagtacaaagacctctgtacacacattacc
tcagacagctacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctc
agttactaccgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcagttgtg
tcttctgtttcagatggcagcaatgtgattggaactgaagagaacagttttgaccgcaac
tatgtaaaaaagaaattggagcatgggctttcacgaatatggcaggatgttcaattgaaa
gtgaaaacgtatcttctgggaacagatctgtctaacttcaaatacgatgacttcatattt
gtacttgatgttatcagcaggctgatgcaggttggagaagaattttgtggtagtaagtcc
gaagttttgcaagaatctatcagaaaacaaagcgttaactatttcaaaacataccacaga
acccgtcttgaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgtt
aaatcaagctttagtattttgcagcttcatgaattcaagttcatggagcagtcgcgttcc
ccatccgtgtcaccgagcaagcagcctgcctcagcagtttcatcgacggtgacgctgttt
gagcagtactgcgccgcaggaaacccctttgagattcaggccgacagcaaagatgatgag
acagaagacgtgttagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatat
caagagtatgatagtgacagtgatgttcctgaagaattgaaaagagattatgtggatgag
cagacaggagatgccccaataaaaagtgtttctcgagaaactctgaggagcagaaagaga
tcagattataacctcaataaagtgaatgcacctattctaaccaacactacactgaatgta
ataaggcttgttgggaaatacatgcagatgatgaatattctgaaacctatcgcatttgat
gtgatccacttcatgtcccagctctttgattactatctgtatgcagtctatacatttttt
ggccgaaatgacatgtttgaatcaacaggactgggcctcagtagcagcagattacgcacc
acactgaacagaatccaggagagtctgattgatctggaggtgtctgctgatccttcagga
actctcacagctgctgaagagagaaaagagaaggtgccaagcccacatctcagtcatctt
gtagttttgacatctggcaattcgctgtatggcttggcagagagagtggtggccacggaa
tccttggtatttctggctgagcagtttgaatttcttcagcctcatcttgatgcagtgatg
ccagctgccaagaagccttttcttcagcagttctattctcagacagtgtcaactgccagt
gaactgcgtaaaccagtttattggattgttgctgctaaagccattgattatgaacaaatg
cttcttctcatggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaacgta
tatgtagatgctcttttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtct
aagagagtccgtattccattgccagtctccaacatcctttgggagcactgcatacgcttg
gccaatagaactcttgtggaaggttatgccaatgtaaagaaatgcagcaatgaaggacgt
gccttgatgcaactggattttcaacagttcttgatgaaactagaaaagttaacagacatt
aggcctattccagataaagaatttgtggagacctacattaaagcatactacctgacagaa
aatgacatggaatcctggataaaagaacatagggaatattccactaagcagttgaccaat
ctggtgaatatttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagct
gccattgatgacacagacaggcctaagagataa
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