Anomalospiza imberbis (cuckoo-finch): 137486206 Help Entry 137486206         CDS       T11605                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism aib  Anomalospiza imberbis (cuckoo-finch) Pathway aib03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:aib00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     137486206 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aib03019]     137486206 (NUP188) Messenger RNA biogenesis [BR:aib03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      137486206 (NUP188) SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like Motif Other DBs NCBI-GeneID:  137486206 NCBI-ProteinID:  XP_068067410 LinkDB All DBs Position 21:complement(5522850..5548225) Genome browser AA seq 1735 aa AA seqDB search MAAGGLSARSSRELWTILLGRSALREPAQIAVELNKHWQRLLEGLSYYKPPSTTSAEKIK ADKDVVAPLKELGLRVSKFLGLDEEQSVQLLQSYLQEDYRGTRDSLKTVLQDERQSQALL LKLADYYYEERICILRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYK AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPEELLAFAKMFKEQ GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNQHI HQEMDNQLLQLGDVSHHAPVLLAWALLRHTINPEESTNIIRRMGSTAIQLNVFQYLTKLL RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK TEPTAGLGIILDSVCGMFPHLLTPLLQLLQSLVSDKSTAKKVYSFLDKMSFYIELYKHKP PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT TVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPLSSMNHMISAEGMNAG GYGNLLMSMEQPQGEYSVTISFLNLVTTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM GIGVDTIDMVMAFQSGSDESQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQHG AHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLTHL QSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVLEL IDSKQQERYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPPPS ESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSTKKRFAYWSEYVKSLAQH VAETEGSSCASVTEYQMLISAWRMLLIISTSHADIMHLTDSAVHQELFMDVLNGTRVLLQ VPMSVPCLQLGSMLCTLLLILLKQWKSELSSVDKIINSLTQILEGVLQADQQMMEKTKAK VFSALITVLQMKEMKVNDIPQYPQLVLSVCETLQDEVIALLDQTRHSLTLGDAADDKDSM ETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFAALEISLR VKQNLHFTEASLHLLLTLARTQQGAAAMAGAGVTQSVCLPLLSVYQLSTNGAIQTSASSR KSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSLAC LEEADHTVGFILQLSNFTKEWHFHLPQLMRDMQVNLCYLCQACTSLLHSRKMLQHYLQTK NGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFTPD VCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGEMDKKKEPF PQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSELS TLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR NT seq 5208 nt NT seq  +upstreamnt  +downstreamnt atggcggcgggcgggctgagcgcgaggagcagcagagaattatggacaattctgctgggc agatcagctttaagagaaccagctcagattgctgtagagttgaacaagcactggcagagg ctcttagagggactgtcatactacaaaccaccgagtacaacttcagcagaaaaaattaaa gctgataaagatgtagttgctccgctaaaagagttgggtctgagagtcagcaagtttttg ggtctggatgaagagcagagtgtgcagttgttacaatcttatcttcaagaggattacaga ggaacaagagactccctgaagacagttcttcaggacgaaaggcagagtcaggctctgttg ctgaagctcgctgactactactatgaggagaggatctgcatcctgcgctgtgtcctccac ctgctcacctatttccaggatgagagacacccttacacagcacagtacttccagtgtgtt gaaaagttggacaaggagctcgttccgaattaccgcaaacagtttgaagcgctgtacaaa gcagaagctcctacatgggaaacacatggaaatctcatgacagaacgtcaggtttcccgg tggtttgtgcagtgccttcgggagcagtccatgctcctggaagtcatcttcctctactat gcatactttgaaatggcacctgaggagctcctggcatttgcaaagatgttcaaggagcag ggatttggcacaagacaaaccaacagacatttagtagatgagagcatggatcaccttgta gatcgtattggctactttagtgctcttattctggtggaaggcatggaaattgactccctc catgagcgtgctttggatgacaggacggaggagcacaagttggccaacaatcagcacatc caccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctccagtg cttttggcctgggctctgctccgtcacaccataaacccagaggagtccacaaacatcatc aggaggatgggcagcactgctatccagctgaatgtcttccagtatctgacaaagctgctg cgatccctcagcagtgggggcaagaattgtactgccagcacagcttgtatgtgtatttat ggactactttcctttgtcctgacatcactggaattacatacactgggcaatcagcaggat ataattgatgctgcatgtgaagttctggcagcttccagcattcctcagctcttctggaaa acggaacctactgcaggtctgggtattatcctagacagtgtttgtggaatgttcccccat cttctcactcctctccttcagctgctccaatcccttgtgtctgataaatctactgcaaaa aaggtatacagtttcctggataaaatgtccttctatattgagctgtacaagcacaaacct ccagatgtgatctcccatgaggacggcacactgtggcgaagacaggctccaaagctcctc tatcctcttggactaggtcaaacaaatctacggatacctcagggaacagtgggccaagtg atgctggatgatcgggcttatttggtacggtgggagtattcctacagcagctggactctg ttcacctgtgagattgagatgctgctccatgttgtgtcaacagcagatgtgattcagcat tgccagagggtcaagcccataattgatctggttcataaagtcatcagcactgatgtgtca atagcagattgtcttctgccaatcacatcacgaatctacatgctcctgcagaggctaaca actgtaatctctccccctgtggatgttattgcttcttgtgtcaattgcttgacagtcctg gctgctcggatgccagccaaggtttggactgaccttcaccacacggggttcttgccattt gttgccaatccactgtccagtatgaatcacatgatcagtgcagagggaatgaatgctggg ggctatggaaacctgttgatgagcatggaacagccccaaggcgagtacagtgttaccatc tccttcctgaacctggtaacaactcttgtccggggacaacttggtagcacccagagccaa ggcctggttccctgcattgtgtttgttctgaaggaaatgttaccaaattaccacaagtgg agatacaactctcatggagtgagagagaaaattgggtgcctaattctgcagctgatccat gctatactgaacttatgccctgaaatggatcctcgcagcagcaatgcccccagcctgcag tccttgtgcatcttcagcctggccaacacggaggcagggcaagctgtcattaacatcatg ggaattggggtggacaccattgacatggtaatggccttccagtccggcagtgatgagtcc caaggccagctgctgatccagacggttaagctggcgttctctgttaccaacaacgtcatc cggctgaagcccccgtccagcgtggtgtctcccctggagcaggcactcactcagcatggt gctcatgggaacaaccttattgctgtcttggccaaatacatttaccacaagcatgaccct gcacttccacgcctggccattcagctgctcaaacgactggctacagttgctcccatgtcc gtgtatgcctgcctgggcagtgatgctgctgccatccgcgacgccttcctcacccacctg cagagcaagattgaggacatgcgcatcaaggtcatgatcctggagttcctcacagttgca gtggagacacaacctgggctcattgagctgttcctgaacttggaagtgaaggatggcagt gatgggtcaaaggaattcagcttgggggagtggagttgcctccaggtggtgttagagctg attgactccaaacagcaggagaggtactggtgccctcccctcctgcaccgtgctgccatc gccttcctgcacgcgctgtggcaggaccgtcgtgacagcgccatgctcgtgctgaggaca aagccaaagttttgggaaaatttaactaatcccctctttgggacccttcctccgccttct gaatcatcagagctcagtgtcttggatacctgtgccttaataatgaaaattatctgcttg gagatctactatgttgtcaagggctcactggatcagtccttgaaagacacgctgaagaat ttctccaccaaaaagcgctttgcctactggtcagagtacgtgaagtccctggcacagcac gtggcagagaccgagggcagcagctgtgcctccgtcaccgagtatcaaatgctcatctca gcctggaggatgctgctcatcatctccacaagccatgctgatatcatgcatctgactgat tctgcagttcatcaggagttgtttatggatgtgctaaatggcaccagggttttgctccag gttcccatgtcagtgccctgtctgcagctggggtctatgctgtgtacccttcttctgatc ctgctcaagcagtggaaaagcgagttgagttctgtggataaaatcataaactccttgacg cagattctggagggagtactacaggcagatcagcagatgatggagaaaaccaaagccaaa gtgttctcagctcttatcactgttctgcaaatgaaggagatgaaagtgaatgacatcccc cagtacccccagctggtgctgagtgtgtgtgagacactccaggatgaggtcattgctctt ttggaccagactcggcacagcctgaccctgggagatgctgcagatgacaaggacagtatg gagactgacgatgcctcccgagtaaagcacaaggaccagcgagacggggtgtgtgttctg ggtcttcacctggctaaggagctctgtgaagtggatgaagatggagactactggctgcag attactaggaaagtccctgtgcttcctaccatctttgctgcactggagatcagcctgaga gttaaacaaaaccttcacttcacagaggcctcgttacatttgctgctcaccttagcaagg actcagcagggagcagcagcaatggctggagctggtgtcacccagagtgtctgcctgccc ctcctgagcgtgtaccagctcagcacaaatggagccattcagacatctgcttcatcccgg aagtccctggatgccccctcctggcccggggtctatcgcctctccatgtccctgatggaa cgtcttctcaaaacactgagatacaacttcctgacagaagcactggactttgtgggtgtc catcaagagaggatccttcagtgcctgaatgcagtacggactgtgcagagcttggcctgt ctggaagaggctgatcacactgttggcttcattcttcagctctcaaatttcacaaaggag tggcatttccacctgccacagcttatgagggacatgcaggtgaatctgtgttacctgtgc caggcctgtacctccctcctgcacagccgtaaaatgctccagcactacctgcagaccaaa aacggcgattcccttccatcgagcgtgactccccgagtgcagcgtaatcctcaggcctcc tccaaacaccccagccccgagtcagaggcagcagagcagaaggccctgctcacagtgcag tacagcctcctcaaaatcctcagcaagtctctcgctgccctgcgccatttcacccctgat gtctgccagatcctccttgaccagtcactggaccttgctgagtataacgtgctctttgtc ttgagtttcaccacaccagcctttgattcggacgttgcaccttccttcgggaccctcctt gccacagtcaacgtggccctgaacatgctgggagagatggataagaagaaagaacctttc cctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctgctcatg tttacaatggagaactgtttctacctgctcatctcccaggctgttcggtacctgcgggac ccggctgtgcacccccgggacaagcagcggatgaagcaggagctcagctcggagctgagt acgctgctctccagcctgtcccgatacttccgccggggtggtccctcttcacctgccagc ggggtccttccctctccccaaggcaagtctgcctccaagctgggtccagaggggcaggag cccttgtttcagctggtgcaggcctttgtccggcacgtgcagagatag

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