Anomalospiza imberbis (cuckoo-finch): 137486495
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Entry
137486495 CDS
T11605
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
137486495 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aib03036
]
137486495 (HDAC5)
Enzymes [BR:
aib01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
137486495 (HDAC5)
Chromosome and associated proteins [BR:
aib03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
137486495 (HDAC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Cluap1
Motif
Other DBs
NCBI-GeneID:
137486495
NCBI-ProteinID:
XP_068067940
LinkDB
All DBs
Position
22:4917104..4936963
Genome browser
AA seq
1128 aa
AA seq
DB search
MLLSGRAGPRGEDGGGGGGAAGRAPGGTGGTPGLPGGAGTAPVPRPALTDTRLCEPPRHP
RATMDPQSDTEGGSGREPPLELLPRVPLHAALPAPACPAGPEGPEAGVDAGLAAAREQQL
QRELVALKQQQQLQKQLLFAEFQKQHEHLTRQHQVQLQKHLKQQQEALAARRQQELEQQR
QRERQELEQQQQRLEQLQSLRPKDRGRDSAIASTEVKLKLQEFLLSKTKEPGPGPPNHSL
PQHPKCWAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTYDGRDDFPLRKTASEPNLKVRSR
LKQKVAERRSSPLLRRRDGSVLSAFRKRHVEITVSSVCSSAPGSGPSSPNSSHGAHNGLA
ASVPNIHSEQLLPQPHALALDGAQLSLYTSPSLPNLSLGLQATVTVTSAHLPVSPKLSPQ
AEGERPGVPPGVSPLRPGAALTGKFLSTSSIPGCLLGVALDGDAPAGSPSLLQHVLLLEQ
ARQQSTLIAVPLHGQSPLVTGERGGGPRGSKLPRHRPLSRTQSSPLPQSPQALPHGPLQH
HFLDKQQLKLLPKGGELARQPPTHPEETEEELTEQQSPPPGERGPPGPPLGPPLALVSPE
AGDPPEQPQDPEGCQEPGDSGDEAEAPGDPDVTELGVTYKQVYPEAPLQLFPAPPLGVLA
LPHPALARTQSSPASVKPPQPEGPPKHLFTTGVVYDTFMLKHQCTCGNTTIHPEHAGRIQ
SIWSRLQETGLLGKCERIRGRKATLEEIQTVHSEHHALLYGTSPLNRQKLDSKKLLGPIT
PKTYAVLPCGGIGVDSDTVWNELHSSSAVRTAVGCLLELAFKVAAGEVKNGFAVIRPPGH
HAEESTAMGFCFFNSVAISAKLLQQRLSVGRILIVDWDIHHGNGTQQAFYSDPHVLYISL
HRYDDGNFFPGSGAPEEVGSGLGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVMPIANEF
SPDLVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMMLAGGRVVLALEGGHDLTAIC
DASEACVTALLGLELEPLDPALLQQKPNVNAVATLEKVIEIQSRHWGSVRRFAAAVGRSL
LEAQRGDTEEAETVTAMALLSVGAERGRDGTEPPARPAEEPMEAEPAL
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgtcggggcgggcggggccgcgcggcgaagatggaggaggaggcgggggggcg
gcggggcgcgcgccgggcggcaccggggggaccccagggctccctggcggcgcgggcaca
gccccggtgccccggccggcgctgacggacacgcgcctctgcgagcccccccggcacccg
cgggccaccatggacccccagagcgacacagagggggggtctggccgtgagcccccgctg
gagctgctgccccgtgtccccctgcacgctgccctgcccgccccagcgtgtccggcaggg
ccggaggggccggaggcaggggtggacgcggggctggcggcggcgcgggagcagcagctg
cagcgggagctggtggccctgaagcagcagcagcagctccagaagcagctgctcttcgcc
gagttccagaagcagcacgagcacctcacccgccagcaccaggtccagctccagaagcac
ctcaagcagcagcaggaggccctggcagcccggcggcagcaggagctggagcagcagcgg
cagcgggagcggcaggagctggagcagcagcagcagcgcctggagcagctccagagcctg
cgccccaaggaccggggccgtgacagtgccatcgccagcacggaggtgaagctgaagctc
caggaattcctgctcagcaagacgaaggagccgggccccggcccccccaaccattccctc
ccccagcaccccaaatgttgggctcaccacacctcgttggaccagagttcccctccccag
accggcagcccggggacccccccgtcctacaagctccccctcctcggcacctatgacggc
cgggacgatttcccgctccgcaaaaccgcctcggagcccaacctgaaggtgcgctcgcgg
ctgaagcagaaggtggcggagcggaggagcagccccctcctgcggcgccgcgacggctcc
gtgctcagcgccttccgcaagcgccacgtcgagatcaccgtgtcatcggtctgcagcagt
gcccccgggtcggggcccagctcccccaacagctcccacggtgcccacaacggcctggcc
gcctctgtccccaacatccacagcgagcagctcctgccccagccccacgccctggctctg
gacggggcccagctcagcctctacacgtccccgtcgctgcccaacctgtccctggggctg
caggccactgtcaccgtcaccagcgcccacctccccgtgtcccccaagctgtcgccacag
gcggagggcgagcggccgggggtgcccccgggggtgtccccgctgcgccccggggccgcc
ctcaccgggaagttcctgagcacgtcctcgatcccggggtgcctgctgggggtggccctg
gacggggacgccccggccgggtccccgtccctgctgcagcacgtgctgctgctggagcag
gcgcggcagcagagcaccctcattgctgtgcccctgcacgggcagtccccgctggtgacg
ggggagcgcggggggggtccccgcgggagcaaactgccgcggcaccggcccctgagccgc
acccagtcgtccccgctgccccagagcccccaggcgctgccccacggccccctccagcac
cacttcctggacaagcagcagctcaagctgctccccaaggggggggagctggcacggcag
ccccccacccaccccgaggagacggaggaggagctgacggagcagcaatcgccccccccg
ggggagagaggcccccccggaccccccctcggtccccccctcgccctcgtgtccccagag
gccggggaccccccggagcagccgcaggaccccgagggctgccaggagccgggtgacagc
ggggacgaggccgaggcccctggggaccccgacgtcactgagctgggggtcacctacaag
caggtgtaccccgaggcgccgctgcagctcttccccgcgccccccctgggggtcctggct
ctgccccaccccgccctcgcccgcacccagtcgtcccccgccagcgtcaagcccccccag
cccgaggggccccccaagcacctcttcaccacaggcgtggtgtacgacacgttcatgctg
aagcaccagtgcacctgtgggaacaccaccatccaccccgagcacgccggccgcatccag
agcatctggtcccggctgcaggaaacggggctgctggggaagtgcgagcggatccggggc
aggaaggcgacgctggaggagatccagacggtgcactcggagcaccacgcgctgctctac
ggcaccagccccttgaaccgccagaaactggacagcaaaaagctgctgggtcccatcact
ccgaagacgtacgcggtgctgccgtgcgggggcatcggggtggacagtgacacggtgtgg
aacgagctgcactcgtccagcgcggtgcgcacggccgtgggctgcctgctcgagctggcc
ttcaaggtggccgccggggaggtcaagaatggcttcgctgtcatccgccccccaggccac
cacgccgaggagtccacggccatgggcttttgcttcttcaactctgtagccatctcggcc
aagctgctgcagcagcggctcagcgtgggcaggatcctcatcgtggactgggacatccac
cacgggaacgggacccagcaggccttctacagtgacccccacgtgctctacatctccctg
caccgctacgacgacggcaacttcttcccgggcagcggagctcccgaggaggtgggcagc
gggctgggcgtgggctacaacatcaacatcgcctggaccggcggcgtggaccccccgatc
ggggacgtggagtacctgacagccttcaggacggtggtgatgcccatcgccaacgagttc
tccccggacctggtgctggtctccgccggcttcgacgccgtcgagggccacctgtccccg
ctcggtggctactccgtcaccgccaagtgtttcgggcacctgacgaagcagctgatgatg
ctggcggggggccgggtggtgctggcgctggaggggggacacgacctgacggccatctgc
gacgcctcggaggcctgtgtcaccgccctgctcggcctcgagctggagcccctggacccg
gccctgctgcagcagaagcccaacgtgaacgcggtggccacgctggagaaggtcatcgag
atccagagccggcactggggctctgtccggcgcttcgccgccgccgtgggccggtccctg
ctggaggcgcagcgcggggacaccgaggaggccgagacggtgacagccatggccctgctg
tccgtgggcgccgagcggggccgggacgggacggagcccccggccaggccagcggaggag
ccgatggaggccgagcccgcgctctga
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