KEGG   Anomalospiza imberbis (cuckoo-finch): 137486836
Entry
137486836         CDS       T11605                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
aib  Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04137  Mitophagy - animal
aib04144  Endocytosis
aib04145  Phagosome
aib04148  Efferocytosis
aib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:aib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    137486836 (RAB5C)
   04145 Phagosome
    137486836 (RAB5C)
   04137 Mitophagy - animal
    137486836 (RAB5C)
   04148 Efferocytosis
    137486836 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    137486836 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aib04131]
    137486836 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aib04147]
    137486836 (RAB5C)
   04031 GTP-binding proteins [BR:aib04031]
    137486836 (RAB5C)
Membrane trafficking [BR:aib04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    137486836 (RAB5C)
 Endosome - Lysosome transport
    137486836 (RAB5C)
Exosome [BR:aib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   137486836 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   137486836 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   137486836 (RAB5C)
  Exosomal proteins of bladder cancer cells
   137486836 (RAB5C)
GTP-binding proteins [BR:aib04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    137486836 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 137486836
NCBI-ProteinID: XP_068068458
LinkDB
Position
22:complement(4026539..4038814)
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcagtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccacgagtaccaggagagcacaattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacagtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcaccaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagcccaaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacagacatatgcagatgacaacagcttgctgttc
atggagacgtcagcaaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga

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