Anomalospiza imberbis (cuckoo-finch): 137486852
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Entry
137486852 CDS
T11605
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137486852 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aib04040
]
137486852 (SCN8A)
Ion channels [BR:
aib04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137486852 (SCN8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
ATP-synt_B
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
137486852
NCBI-ProteinID:
XP_068068478
LinkDB
All DBs
Position
22:complement(6212160..6279529)
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AA seq
1776 aa
AA seq
DB search
MMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCL
SVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSKGFDWEEYTNNMSNFYIIPGAPDPL
LCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRA
AGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQ
QEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELS
EGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSS
IFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRS
SRIFPTLRRSIKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSM
DQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWMKLKE
IVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKL
IAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNML
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINPECELPRWHMHDFFH
SFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADN
LAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAHFKQREADEVKPLDELYDKKVNC
IANHTGADINRDIDFLKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESD
FENLNTEDFSSDTDPDGSKEKLDETSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEG
CMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQ
RKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANAL
GYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIM
GVNLFAGKYHYCFNETAEHRFEIEVVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYL
ALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVII
DNFNQQKKKISDLYIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAF
DIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTIG
WNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTS
AGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAI
ILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKP
NTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYE
PITTTLRRKQEEVSAVVIQRAYRARLARRGFISRRPASTKLENGGANREKKEGTPSTASL
PSYDSVTKPEKEKQQRAEEGRREKARRQKDARVAKC
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtatataacagagtttgtaaacctaggcaatgtttcagctctgcgcactttc
agggttctgagagctttgaaaactatttctgtaattccaggcttgaagaccatcgtgggt
gccctgatccagtctgtgaagaagctgtcggatgtgatgatcctgacagttttctgtctc
agtgtctttgccctcattgggctccagctgttcatgggcaatttaaggaacaagtgtgtg
atttggccaattaatgtgaacgagaccttcctggataatggctccaagggctttgactgg
gaggaatacaccaacaatatgtcaaatttttacatcattcctggcgcccccgaccctttg
ctctgtggtaacagctcagatgcaggccaatgcccagagggatacacgtgcatgaaggca
ggacggaaccccaactacggctacacgagctttgacaccttcagctgggctttcctggct
ttatttcgccttatgactcaggacttttgggaaaacttgtatcaattaactttacgagcg
gcaggaaaaacctacatgatcttctttgtgctggtgatctttgtgggatccttctacctg
gtgaatctgattttggctgtggtggccatggcctacgaggagcagaaccaggcaaccctg
gaggaggcagagcagaaggaggcagaattcaaggccatgttggaacaattgaaaaagcag
caggaagaagcacaggctgctgccatggtcacctcggcagggacggtgtctgaagatgct
gtggaagatgatggtggggggaggatgtctcggagctcctcggagatttccaaactcagc
tccaagagcgccaaggagcgtcggaacaggaggaagaagaggaaggacaaggagctgtcg
gaaggagatgagaagtgtgacaatgagaaggtgttcaagtcagaatctgaggatggcatg
aggaggaaagcgttcaggctgccggataacaggctgggaaggaaattttccatcatgaac
cagtctctcctcagcatcccgggctcccctttcctctcgcgccacaacagcaagagcagc
atcttcagctacaaggggcgcttccgcgacccgggctcggagaacgagttcgccgacgac
gagcacagcacggtggaggagagcgagggcaggagggactcgctcttcatccccatccgc
ggccgcgaccggcgcagcagctacagcggctacagcggctacagccagggcagccgctcc
tcgcgcatcttccccacgctgcgccgcagcatcaagaggaacagcaccgtggactgcaac
ggcgtcgtgtccctcatcggagggccgccgtccagcatgcctggtggccgcatcctgccc
gagggtaccactgaaattgaaatcaggaagaagcctggtgggtctctcttggtctcaatg
gatcaggtgaacgcgtcctatggaaggaaggatcggaccaacagtgtcatgactgggttg
accaacacccttgttgaggagctggaagagtcccagaggaagtgtcccccttgctggtac
aaatttgccaacaccttcctgatctgggaatgccacccatactggatgaagctgaaggag
atcgtgaacttaattgtcatggatccttttgttgacttggccatcaccatctgcatcgtg
ctgaacacgttgttcatggccatggagcaccaccccatgacccccgagttcgagcacgtg
ctctctgtaggaaatctggttttcactgggattttcacagcagaaatgttcctgaagctc
attgcaatggatccatactattattttcaagaaggctggaacatctttgatgggtttatt
gtctccctgagcttaatggagctgagtctggcagatgtggagggactttccgtgctgcga
tctttccgactgctgagagtcttcaaactggccaagtcctggcccactctgaacatgctg
ataaaaatcattggcaactcagtgggtgccttggggaatttgaccttggtgctggccatc
atcgtgttcatcttcgccgtggtgggaatgcagctcttcggcaaaagctacaaggagtgt
gtctgcaagatcaatccggagtgtgagctaccccgctggcacatgcacgatttcttccac
tccttccttattgtcttccgtgtgttgtgtggggagtggattgagaccatgtgggattgt
atggaagtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtcatcgga
aatttagtggtgctgaacctgttcttggccttgctgctgagctccttcagcgcagacaac
ctggcggccacggacgacgacggggagatgaacaacctgcagatctcggtgatccgcatc
aagaagggcattgcctggaccaaggccaaggtcagggagttcatgcaggcccacttcaag
cagagagaggcggacgaggtgaagcccttggacgagctgtacgacaagaaggtgaactgc
atcgccaaccacaccggggccgacatcaaccgcgacatcgatttcctcaagaacggcaac
ggcaccaccagcggcatcgggagcagcgtggagaagtacatcatcgacgaggaccacatg
tccttcatcaacaaccccaacctgaccgtgcgcgtccccatcgccgtgggcgagtccgac
ttcgagaacctcaacacggaggatttcagcagcgacacggatcccgacggcagcaaggag
aaactcgacgagaccagctcctctgagggcagcaccatcgatataaagcctgaagtggaa
gaggtgcccgtggaggcaccagaggagtacctggaccccgatgcctgtttcacagaaggt
tgcatgcagcgctgcaagtgttgccaggtcaatattgaggaggggctgggaaagtcgtgg
tggaccttgaggaaaacttgtttcctaattgtggagcacaattggtttgagactttcatc
atctttatgatcctcctgagcagtggggctctggcttttgaggacatttacatcgagcag
aggaaaaccatcaggaccatcctggagtatgcagacaaggtgttcacttacattttcatc
ctggagatgctgctgaagtggtgtgcctatggatttgtcaagttcttcaccaacgcctgg
tgctggctggatttcctcatcgtggctgtctctttagtcagccttatagctaatgccctg
ggctactcggaactaggtgccataaaatcccttaggaccctaagagccttgaggccttta
agagcgttgtcccgatttgaggggatgagggtggttgtcaatgccttggttggcgctatc
ccttccattatgaatgtcttgttggtctgccttatcttctggctgattttcagcattatg
ggggttaacctgtttgccgggaaatatcattactgctttaatgaaacagctgagcatcgc
tttgaaattgaggttgttaacaacaagacagactgcgaggctctgatgccgcccaactcc
acggagatccgatggaagaacgtgaaaattaactttgacaacgttggggcaggatatctg
gctctgctgcaagttgctacattcaagggctggatggacatcatgtatgcagctgtagat
tccagaaagcaagaagagcagcccaagtacgaggacaacatttacatgtacatttatttt
gttatcttcatcatcttcggttcctttttcaccctgaacctgttcattggtgtcatcatc
gacaacttcaatcaacagaagaaaaagataagtgatctgtatattttcatgacagaagaa
caaaagaagtactacaatgccatgaaaaaactgggctcaaagaagccccaaaaacccatt
ccccgacctctgaaccgcatccaaggagccgtcttcgactttgtaacccagcaagccttc
gacatcgtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggagacagat
acgcagagcaagcagatggaggacatcctttactggatcaactttgtgtttgtcatcttt
ttcacctgtgagtgcgtgctgaagatgttcgccttgaggcactactacttcaccatcggg
tggaacatctttgacttcgtggttgtgattctgtccatcgtggggatgttcctggctgaa
atcatcgagaagtacttcgtgtcacccaccctgttccgagtgatccgcctggctcgcatc
ggccgcatcctgcgcttgatcaagggagccaaagggatccgcacgctgctttttgcctta
atgatgtccctgcctgccttgttcaacatcggcctcctgctcttcctggtcatgttcatc
ttctccatcttcggcatgtccaacttcgcctacgtcaagcacgaggccggcatagacgac
atgttcaactttgagacctttggcaacagcatgatctgcttgttccagatcaccacctcg
gccggctgggacgggctcctgctgcccatcctcaaccggccacccgactgtgacctggac
aaggagcacccgggcagcggcttcaagggggactgcgggaacccctcggtggggatattt
ttcttcgtgagctacatcatcatctccttcctgatcgtggtcaacatgtacatcgccatc
atcctggagaacttcagcgtggcgacggaggagagcgcggatccgctcagcgaggacgac
ttcgagacgttctacgagatctgggagaagttcgaccccgacgccacgcagttcatcgag
tacagcaagctggcggacttcgccgacgccctggagcatcccctgcgcgtgccgaagccc
aacaccatcgaactcatcgccatggacctgcctatggtaagtggggacaggatccactgt
ttggacatcctgtttgccttcaccaaacgtgtcctgggggacagcggggagctggatatc
ctgagacagcagatggaggagaggtttgtggcttccaacccttccaaagtgtcttatgag
cccatcaccaccacgctgcggcgcaagcaggaggaggtgtcggcggtggtgatccagagg
gcttacagggctcgtttggcacgacggggcttcatcagccgaaggcctgccagcaccaaa
ctggaaaacgggggagcaaacagggagaaaaaggagggcaccccatccacggcgtccctg
ccgtcctacgacagcgtcaccaaacccgagaaggagaaacagcagcgggcggaggagggc
aggagggaaaaggcaaggagacaaaaagacgccagggtggccaagtgttga
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integrated database retrieval system
