Anomalospiza imberbis (cuckoo-finch): 137486917
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Entry
137486917 CDS
T11605
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137486917 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aib03021
]
137486917 (SMARCD1)
03036 Chromosome and associated proteins [BR:
aib03036
]
137486917 (SMARCD1)
Transcription machinery [BR:
aib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137486917 (SMARCD1)
Chromosome and associated proteins [BR:
aib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137486917 (SMARCD1)
PBAF complex
137486917 (SMARCD1)
GBAF(ncBAF) complex
137486917 (SMARCD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
137486917
NCBI-ProteinID:
XP_068068612
LinkDB
All DBs
Position
22:7253509..7260256
Genome browser
AA seq
511 aa
AA seq
DB search
MAARAGFQSGPASGGAAGAAPGAALGPGAPGGAVRMGPAPGQGLYRSPLPGAAYPRPGML
PGGRLAPQGPAMGPPGYGGSPAVRPALAQAGLDQARKRPAPQQLQQVQPQTVPNRNHNAK
KKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRI
FISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIEL
DKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARL
LGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHAL
LMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKI
HETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQ
PWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggccgggttccaatcggggcctgcgagcggcggcgccgccggggccgcg
cccggggccgcgctgggcccgggagcgccgggcggggcggtgcgcatgggcccggcgccg
gggcaaggcctgtaccgctcaccgttgcccggagccgcctacccgcgccccgggatgctg
ccgggcggccgcctggcgccgcagggcccggccatgggtcctcccgggtacggcgggagc
ccagccgtgcggcccgcgctggcgcaggccgggctggaccaggctcgcaagcggccggcg
ccgcagcagctccagcaggtgcagccgcagacggtgcccaaccgcaaccacaacgccaag
aagaagaagatggcagataaaattctcccgcagaggatccgtgagctcgtgcccgaatcc
caggcctacatggacttgctggccttcgagaggaagctggaccagaccatcatgaggaag
cgcctggatatccaggaggctctgaaacgtcccatcaagcaaaagcgaaagctgcgtatt
tttatctccaacaccttcaaccccgccaagtcggacgcggaggacggcgaaggaaccgtc
gcctcctgggagcttcgggtggaaggacggctgttggaggattctgctctgtccaaatat
gatgccaccaagcagaaaaggaaattttcgtccttctttaaatctctggtcattgaactt
gataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctacaact
caggagacagatggcttccaggtgaagaggccgggggatgtgaacgtgcgctgcactgtc
ctgctgatgctggattaccagcctccccagttcaaactggatccacgcctggctcggctc
ctgggcatccacacccagacccggcccgtgatcatccaggccctgtggcagtacatcaag
acccacaagctgcaggacccccacgagcgggagtttgtcatctgtgacaagtacctgcag
cagatattcgagtcgcagcggatgaagttctctgagatcccacaaaggcttcatgccttg
ctgatgccccccgaaccgatcatcatcaatcacgtgatcagtgttgacccaaatgaccag
aagaaaacagcctgctatgacattgacgtggaggtggacgataccctgaaaactcagatg
aattcctttctgctctccacagccagtcaacaggaaattgctgctctggataacaagatc
catgaaacaattgagaccatcaaccagctgaagacacagcgtgaattcatgctgagcttt
gcccgagatcctcagggcttcatcaatgactggctccagtcccagtgccgggatttgaag
acaatgactgatgtcgttgggaatcccgaggaggagcgcagagccgagttctacttccag
ccgtgggcgcaggaagccgtgtgccgatacttctactccaaggtgcagcagagacggcag
gaattggagcaggccctggggatccggaacacatag
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