Anomalospiza imberbis (cuckoo-finch): 137487014
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Entry
137487014 CDS
T11605
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aib Anomalospiza imberbis (cuckoo-finch)
Pathway
aib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137487014 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aib03019
]
137487014 (HNRNPA1)
03041 Spliceosome [BR:
aib03041
]
137487014 (HNRNPA1)
Messenger RNA biogenesis [BR:
aib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137487014 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
137487014 (HNRNPA1)
Spliceosome [BR:
aib03041
]
Common components
Common spliceosomal components
hnRNP proteins
137487014 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
137487014
NCBI-ProteinID:
XP_068068757
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All DBs
Position
22:6902990..6912252
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AA seq
355 aa
AA seq
DB search
MAKAESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASAGQRGCAPPPPPLLGRSGSGNFGGGGGRGGGFGGGDNFNRGGNFGGRYGG
GGGGPGYSGGNRGYGGSGSYDGYNNGGGGFGGGSGGRRPARGPALAVRNGLAEAGTGSNF
GGGGSYNDFGSYNNQASSFGPMKGGSFGGRSSGPYGGGGYGSSSGGGSYGGGRRF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccgagtccccgaaggagccggagcagctccggaagcttttcatcgggggc
ctgagcttcgagaccacggacgagagcctgcgcagccacttcgagcagtggggcacgctc
accgactgcgtggtgatgcgggaccccaacacgaagcgctcgcggggctttggcttcgtc
acctactcctcggtcgaggaggtcgacgccgccatgaacgcgcggccacacaaggtggat
ggcagggtggtggagcccaaacgggccgtgtccagagaggactcgcagcggcccggcgcg
cacctgacggtgaagaagatcttcgtgggcggcatcaaggaggacacggaggagcaccac
ctgcgcgactacttcggccagtacggcaagatcgaggtcattgagatcatgaccgaccgc
ggcagcggcaagaagcgcggcttcgccttcgtcaccttcgacgaccacgactccgtggac
aaaatcgtcatccagaagtaccacacggtgaacgggcacaactgcgaggtgcgcaaggcc
ctgtccaagcaggagatggccagcgcctcggccggccagcgaggctgtgccccccccccg
ccccctctgctaggccgcagcggctccggaaacttcggcggtggcggcggccgcggtggc
ggcttcggcggcggtgacaacttcaaccgaggcggcaacttcgggggacgttacggtggc
ggcggcggcggccccggctactccgggggcaaccggggctacggcggcagcggctcctac
gacggctacaacaacggcggcggcggctttggcggcggcagcgggggccggcggccggcg
cggggaccggcgctggccgtgcgcaacgggctggccgaggcgggcacaggcagcaatttc
gggggcgggggcagctacaacgacttcggcagctacaacaaccaggcctcgagcttcggg
cccatgaagggcggcagcttcggggggcgcagctcgggcccctacggcggtggcggctac
ggcagctccagcggcggcggcagctacggaggagggaggaggttttaa
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