KEGG   Aequorivita iocasae: JK629_00170
Entry
JK629_00170       CDS       T07991                                 
Name
(GenBank) UvrD-helicase domain-containing protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aic  Aequorivita iocasae
Pathway
aic03420  Nucleotide excision repair
aic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JK629_00170
   03430 Mismatch repair
    JK629_00170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aic03400]
    JK629_00170
Enzymes [BR:aic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JK629_00170
DNA repair and recombination proteins [BR:aic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JK629_00170
   MMR (mismatch excision repair)
    Other MMR factors
     JK629_00170
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30 ResIII DEAD
Other DBs
NCBI-ProteinID: QQX76725
LinkDB
Position
complement(33480..35798)
AA seq 772 aa
MEQYLKQLNEAQLAPVLQKDGAMIVIAGAGSGKTRVLTFRIAYLMSQGVDPFNILALTFT
NKAAREMKGRISKIVGASEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSHSV
IRAVIKEMNLDKDVYKYKQVYSRISSYKNSLITVKAYFNNPELMEADAMAKMPRLGDIYK
AYVDKCFKAGAMDFDDLLLKTNELLTRFPDVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVKVFRLEQNYRSTKNIVNAANN
IIEKNKTRLEKVVWTANDEGNKILVNRTMTDGDEGRFVASSIFENKMNHQLNDGDFAVLY
RTNAQSRAIEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLVLNPKDEEALKRVINYP
SRGIGDTTTERLIVAANHYNRSIFEVMKNIDKIDLKINAGTKSKLQDFVTMIESFQVLNQ
GYDAFTITEHVAKKTGLLQELKKDGTPEGIARIENIEELLNGMRDFVEEQKEIADATGSL
SEFMEDVALATDLDNDKGDNDRVALMTVHLAKGLEFPYVYIVGMEEDLFPSGMNMNSRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLIDAEPSRFIEEIDESFLEYLTPITENR
YKPLLDADIFDEVDHSKLRLRKPVSGKAPTGPTEAQLRKLRRLKPVASDTDKNFSAADAH
LNVGTMVEHVRFGKGKILKIEGVGADTKAEIDFENGGLKKLLLRFAKLKVLD
NT seq 2319 nt   +upstreamnt  +downstreamnt
ttggaacagtatttaaaacaactcaacgaggcccagcttgcgccagtgctgcaaaaagac
ggcgcaatgatcgtgattgccggggctggttcgggcaagacgcgcgtgctaacttttcgc
attgcatatttgatgagtcagggcgtggatccgttcaatattttggcgcttacgtttacc
aataaggccgcaagggaaatgaaagggcgtatctcaaaaattgttggcgctagcgaagca
aaaaatctttggatgggcaccttccacagtatttttgcaaaaatccttcgttttgaagcc
gataaattgggctacccttccaacttcaccatttatgacacccaagactcacacagtgta
attcgcgcagtgataaaggaaatgaacctagataaagatgtgtataaatacaagcaggtt
tattcgcgcatatcttcctataaaaacagtttaattaccgtaaaagcatatttcaacaat
ccggaattgatggaagccgacgcgatggcgaaaatgccgcgcctcggcgatatttataaa
gcttacgttgacaaatgcttcaaagctggcgcaatggattttgatgatcttttactgaaa
accaacgaactgctaacgcgttttccagatgttttggcaaagtatcaaaaccgtttccgc
tatattttggtagatgagtaccaggataccaaccacagtcagtatttgattgttcgtgca
ctttctgacaggtttcaaaatatatgtgtagtaggtgatgatgcacagagtatctacgca
ttccgcggtgcgaacatcaacaatattttgaatttccaaaaggactatgacaatgtgaag
gttttccgtttggaacaaaattaccgttctaccaaaaatatcgtaaatgccgcaaacaat
attattgaaaagaacaaaacacgactcgaaaaagtggtttggacggcaaatgacgaaggc
aataaaattctcgtaaaccggaccatgaccgatggggacgaaggacgctttgtggccagc
tccatttttgaaaataaaatgaaccatcaattgaatgatggtgattttgcagttttatac
cgaacaaacgcacagagccgtgctattgaggatgcgcttaggaaaaaggacattccgtac
agaatttacggagggcttagtttttatcagcgaaaagaaataaaagatgtactagcttat
ttgcggttggtattaaatccgaaagatgaagaggcgctgaaacgtgtcataaattatcca
tcacgcggcattggtgataccactacggaacgtttaatagttgccgcaaaccattacaac
cgttcgatttttgaggtaatgaaaaacatcgataaaattgatttaaagataaatgctggc
accaaaagcaaattgcaggattttgttacgatgattgaaagctttcaggttttgaaccaa
ggttatgatgctttcacaataacggaacatgttgccaaaaaaacaggtttgttgcaggaa
ttaaagaaagacggcacccccgaaggtattgcacgtatcgaaaacattgaggaattactg
aacgggatgcgcgattttgtggaagaacaaaaggaaattgccgatgccacaggttcgctt
tcggaatttatggaagatgttgcgctcgccaccgatttggataatgacaaaggtgataac
gaccgtgtcgcactgatgacggtacatttggcgaaaggtttggaatttccctacgtatac
attgtgggtatggaagaagatcttttccccagcgggatgaatatgaattcccgcagtgag
ttagaagaagagcgaagacttttttacgtggccctaacccgagccgagaaacaggcatat
ttgacttatacccaatcgcgctaccgttggggaaaattgattgatgccgagccgagtcgt
tttatcgaggaaattgatgaaagctttttggaatatctaacccctattaccgaaaatcgc
tacaaacctcttttggatgccgatatttttgatgaggttgaccacagcaagctgcgattg
cgaaagcctgtttctggtaaagccccaacgggacccacagaagctcagcttcgaaaattg
cggagattgaagcccgtggccagcgataccgataaaaattttagtgcagcagacgcccat
ctcaacgtgggaacgatggttgagcatgttcgcttcggaaaaggaaaaatccttaaaata
gaaggagtgggtgccgatacaaaggcagagattgattttgaaaacggtggattaaaaaaa
ctgttgcttcgctttgctaaactgaaagttctggattaa

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