Aequorivita iocasae: JK629_00170
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Entry
JK629_00170 CDS
T07991
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aic
Aequorivita iocasae
Pathway
aic03420
Nucleotide excision repair
aic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JK629_00170
03430 Mismatch repair
JK629_00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_00170
Enzymes [BR:
aic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JK629_00170
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JK629_00170
MMR (mismatch excision repair)
Other MMR factors
JK629_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQX76725
LinkDB
All DBs
Position
complement(33480..35798)
Genome browser
AA seq
772 aa
AA seq
DB search
MEQYLKQLNEAQLAPVLQKDGAMIVIAGAGSGKTRVLTFRIAYLMSQGVDPFNILALTFT
NKAAREMKGRISKIVGASEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSHSV
IRAVIKEMNLDKDVYKYKQVYSRISSYKNSLITVKAYFNNPELMEADAMAKMPRLGDIYK
AYVDKCFKAGAMDFDDLLLKTNELLTRFPDVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVKVFRLEQNYRSTKNIVNAANN
IIEKNKTRLEKVVWTANDEGNKILVNRTMTDGDEGRFVASSIFENKMNHQLNDGDFAVLY
RTNAQSRAIEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLVLNPKDEEALKRVINYP
SRGIGDTTTERLIVAANHYNRSIFEVMKNIDKIDLKINAGTKSKLQDFVTMIESFQVLNQ
GYDAFTITEHVAKKTGLLQELKKDGTPEGIARIENIEELLNGMRDFVEEQKEIADATGSL
SEFMEDVALATDLDNDKGDNDRVALMTVHLAKGLEFPYVYIVGMEEDLFPSGMNMNSRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLIDAEPSRFIEEIDESFLEYLTPITENR
YKPLLDADIFDEVDHSKLRLRKPVSGKAPTGPTEAQLRKLRRLKPVASDTDKNFSAADAH
LNVGTMVEHVRFGKGKILKIEGVGADTKAEIDFENGGLKKLLLRFAKLKVLD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
ttggaacagtatttaaaacaactcaacgaggcccagcttgcgccagtgctgcaaaaagac
ggcgcaatgatcgtgattgccggggctggttcgggcaagacgcgcgtgctaacttttcgc
attgcatatttgatgagtcagggcgtggatccgttcaatattttggcgcttacgtttacc
aataaggccgcaagggaaatgaaagggcgtatctcaaaaattgttggcgctagcgaagca
aaaaatctttggatgggcaccttccacagtatttttgcaaaaatccttcgttttgaagcc
gataaattgggctacccttccaacttcaccatttatgacacccaagactcacacagtgta
attcgcgcagtgataaaggaaatgaacctagataaagatgtgtataaatacaagcaggtt
tattcgcgcatatcttcctataaaaacagtttaattaccgtaaaagcatatttcaacaat
ccggaattgatggaagccgacgcgatggcgaaaatgccgcgcctcggcgatatttataaa
gcttacgttgacaaatgcttcaaagctggcgcaatggattttgatgatcttttactgaaa
accaacgaactgctaacgcgttttccagatgttttggcaaagtatcaaaaccgtttccgc
tatattttggtagatgagtaccaggataccaaccacagtcagtatttgattgttcgtgca
ctttctgacaggtttcaaaatatatgtgtagtaggtgatgatgcacagagtatctacgca
ttccgcggtgcgaacatcaacaatattttgaatttccaaaaggactatgacaatgtgaag
gttttccgtttggaacaaaattaccgttctaccaaaaatatcgtaaatgccgcaaacaat
attattgaaaagaacaaaacacgactcgaaaaagtggtttggacggcaaatgacgaaggc
aataaaattctcgtaaaccggaccatgaccgatggggacgaaggacgctttgtggccagc
tccatttttgaaaataaaatgaaccatcaattgaatgatggtgattttgcagttttatac
cgaacaaacgcacagagccgtgctattgaggatgcgcttaggaaaaaggacattccgtac
agaatttacggagggcttagtttttatcagcgaaaagaaataaaagatgtactagcttat
ttgcggttggtattaaatccgaaagatgaagaggcgctgaaacgtgtcataaattatcca
tcacgcggcattggtgataccactacggaacgtttaatagttgccgcaaaccattacaac
cgttcgatttttgaggtaatgaaaaacatcgataaaattgatttaaagataaatgctggc
accaaaagcaaattgcaggattttgttacgatgattgaaagctttcaggttttgaaccaa
ggttatgatgctttcacaataacggaacatgttgccaaaaaaacaggtttgttgcaggaa
ttaaagaaagacggcacccccgaaggtattgcacgtatcgaaaacattgaggaattactg
aacgggatgcgcgattttgtggaagaacaaaaggaaattgccgatgccacaggttcgctt
tcggaatttatggaagatgttgcgctcgccaccgatttggataatgacaaaggtgataac
gaccgtgtcgcactgatgacggtacatttggcgaaaggtttggaatttccctacgtatac
attgtgggtatggaagaagatcttttccccagcgggatgaatatgaattcccgcagtgag
ttagaagaagagcgaagacttttttacgtggccctaacccgagccgagaaacaggcatat
ttgacttatacccaatcgcgctaccgttggggaaaattgattgatgccgagccgagtcgt
tttatcgaggaaattgatgaaagctttttggaatatctaacccctattaccgaaaatcgc
tacaaacctcttttggatgccgatatttttgatgaggttgaccacagcaagctgcgattg
cgaaagcctgtttctggtaaagccccaacgggacccacagaagctcagcttcgaaaattg
cggagattgaagcccgtggccagcgataccgataaaaattttagtgcagcagacgcccat
ctcaacgtgggaacgatggttgagcatgttcgcttcggaaaaggaaaaatccttaaaata
gaaggagtgggtgccgatacaaaggcagagattgattttgaaaacggtggattaaaaaaa
ctgttgcttcgctttgctaaactgaaagttctggattaa
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