Aequorivita iocasae: JK629_00370
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Entry
JK629_00370 CDS
T07991
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aic
Aequorivita iocasae
Pathway
aic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JK629_00370 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aic03019
]
JK629_00370 (recQ)
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_00370 (recQ)
Enzymes [BR:
aic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JK629_00370 (recQ)
Messenger RNA biogenesis [BR:
aic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JK629_00370 (recQ)
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JK629_00370 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
QQX78132
LinkDB
All DBs
Position
complement(77359..79551)
Genome browser
AA seq
730 aa
AA seq
DB search
MAEFDIYAALKKYFGFTRFKGLQEEVVKSILNGHNTFVVMPTGGGKSLCYQLPALMQDGT
AIVVSPLIALMKNQVDALRSLSAEEGIAHVLNSSLNKTEVKRVKNDISSGVTKLLYVAPE
SLTKEEYVDFLQTQKISFMAIDEAHCISEWGHDFRPEYRNLKSIIQRIGNDIPIIGLTAT
ATPKVQEDILKNLNMQDANTFKASFNRPNLYYEIRPKTKNVDSDIIRFVKQNEGKSGIVY
CLSRKRVEELAQALQVNGIKAVPYHAGLDGKTRVKHQDMFLMEDVDVVVATIAFGMGIDK
PDVRFVIHNDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEI
GQALLQEVVAFAETSISRRKFILHYFGEEFDNETGEGGMMDDNMRHPKKKHEAKEDAKQL
LEVVSKTNEQYKSKEIVNVLVGKVNALIKSHRTDAQAYFGSGANHEPAYWMALLRQLLVA
GYLKKDIETYGVIHLTEEGKKFIKSPTSFMMTEDHSFKDANDDVIVGVQKGGEVVDENLF
KILKAELKKVAHDLDLPPFVIFQEPSLEDMALKYPITLEELSNVHGVGEGKAKKYGKPFI
KIIQNYVEENDIIRPEDFVVKSTGSNSSLKLYIIQNVDRKLALPDIANAKGLEMPEFIKE
MEAIVYSGTKLNIDYWIDEVLDEDQQEEIHEYFLEAKTDKIEEALDEFDGDYDEEELRLY
RIKFISEVGN
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaatttgatatttacgcagccctgaaaaaatattttggatttacaagatttaaa
ggcttgcaggaggaagtagtcaaaagcatcctcaatggccataatacctttgtggtcatg
cctactggcggaggaaaatcactgtgttaccaacttccggcacttatgcaggatggtaca
gctatagtagtttccccactcattgcacttatgaaaaaccaagtggatgcgctgcgttct
ctttctgcggaagaagggatagcacacgttttaaattcttccctcaataaaactgaggta
aagagagtgaaaaacgatatttccagtggagtaacaaaattactctacgttgcccccgaa
tctttaacaaaagaagagtatgtagattttctgcaaacccagaaaatttcttttatggct
attgacgaggcccattgcatcagcgagtgggggcatgattttcggccagaataccgaaac
ctaaaaagtattatacagcggataggaaatgatatacctattatagggcttaccgccact
gcaactccaaaagtacaggaagatatattgaaaaacctcaatatgcaggatgcaaatacc
tttaaagcatctttcaaccgtccaaacttatattacgaaatacgcccaaaaaccaaaaat
gtagattcagatatcattcgttttgtaaaacagaacgagggcaaaagcggtattgtgtac
tgtttaagtagaaaaagagtggaagaactggctcaggcattgcaagtcaatggtataaaa
gctgtaccctatcacgcaggtctcgacggtaaaacacgggtaaagcaccaagacatgttt
ttgatggaagacgtagatgtggtagttgccacaatcgccttcggaatgggcatagacaaa
ccggatgttcgctttgttatccataacgatattccaaaaagcattgaaagctattaccaa
gaaaccggacgtgcaggccgcgatgggggcgaagggcattgccttgctttctatagttat
aaagacatagaaaaattggaaaagtttatgagcggaaagcctgttgccgaacaggaaata
ggtcaagcgcttttgcaggaagtagtcgcttttgcggaaacttccatttcccgcagaaag
ttcatcctacattattttggggaagaatttgacaatgaaacaggcgaaggcggaatgatg
gacgacaatatgcgccaccccaaaaaaaagcacgaggcaaaagaagatgccaaacaactt
cttgaagtagtttcaaaaaccaatgaacaatacaaaagcaaggaaattgtaaatgtcctg
gttggtaaggtcaatgcgcttataaaatcgcacagaaccgatgcccaggcatattttggt
tctggagcaaatcatgaacctgcttattggatggcactgcttcgtcaacttttggttgct
ggatatctgaaaaaagatattgaaacctatggcgtgatccatttaaccgaagaaggaaag
aaatttataaaatcgcccacttcctttatgatgaccgaagaccattcctttaaagatgca
aatgatgatgtgatagttggtgttcaaaaaggaggcgaagttgtagatgaaaatcttttc
aaaattctgaaggcagaactcaaaaaagttgctcacgatttagacttgccaccttttgtt
atttttcaggagccttctctggaagatatggcgcttaaatacccaattaccttggaggaa
ctctcaaatgtgcacggtgtaggggagggtaaagccaaaaaatacggcaaaccatttata
aaaataatacaaaactacgtagaggaaaacgatataattaggccagaagatttcgtggta
aagtctaccggaagcaatagttctttgaaactatatattattcaaaacgtggatcgcaag
cttgccttgccagatattgccaacgccaagggccttgaaatgccggagtttataaaggaa
atggaagccatcgtttacagcggtaccaagctgaatatagattattggattgacgaggtg
cttgatgaagaccaacaggaagaaatccatgaatatttcttagaggctaaaaccgataaa
atagaagaggctttagacgaatttgatggggattatgacgaagaggaattgcgcttgtac
cgaattaaatttatcagtgaagttgggaattag
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