Aequorivita iocasae: JK629_01640
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Entry
JK629_01640 CDS
T07991
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aic
Aequorivita iocasae
Pathway
aic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JK629_01640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aic03019
]
JK629_01640
03016 Transfer RNA biogenesis [BR:
aic03016
]
JK629_01640
Enzymes [BR:
aic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JK629_01640
Messenger RNA biogenesis [BR:
aic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JK629_01640
Transfer RNA biogenesis [BR:
aic03016
]
Prokaryotic type
tRNA degradation factors
JK629_01640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QQX77003
UniProt:
A0ABX7DTX5
LinkDB
All DBs
Position
337303..339537
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AA seq
744 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDEDVMPDAMAGLAASAAIQLSDFPFECAISEARVGRIDGKFIINPTRAQLEESDIDMVI
GASADSVMMVEGEMKEISEEEMVEAIKFAHEAIKKQIDAQIRLAEAVGRKEVREYEPERE
DDDLKKKIHELAYDKVYAVAKSASAKHERSASFDAIKEEIKATFSEEELEDFGDLISKYY
YKAEKAAVRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSREANQIDMPSFEGEETFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMIPA
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDAGVQLKKPVSGIAMGLISDGETGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQAAAGRLHILEKL
TDTIATPNADVKPHAPKMVTVTIPNEYIGALIGPGGKVIQELQKATKTTIVINEDPVTEE
GIVEILGTNQEGIDAVLAKIDSLTFKPEVGSVYEVKVIKMLDFGAVVEYTDAPGNETLLH
VSELAWERTENVSDVVNMGDVFDVKFLGFDPRTKKDKVSRKALLPKPEGYKERPPRDDNR
SGGRDNRGRDNRGRDNRDRDRKRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgatacctaaagtatttagagaggtcatagaccttggtgatggacgtgaaatctccatc
gaaaccggaaaattggcaaaacaggcacacggttctgtagttgtgcaatccggaaaatgt
atgctgctttgtaccgtagtttcaaactacaaacagagcgatgttgattttctaccatta
accgtagattatcgtgaaaaatttgctgcttcgggtcgttaccctggcggtttcttcaaa
agggaagcaagaccaagcgatggcgaagtacttacaatgcgccttgtggaccgcgtactg
cgtccacttttcccaaaagattatcacgccgaaacccaagtgatgatccaattgatgagc
cacgatgaggatgtaatgccagatgcaatggcaggtttggccgcttccgcagctatccag
ctatccgacttcccttttgaatgtgcaatttctgaagcgcgtgtgggaagaatagatggt
aaattcatcattaacccaactcgtgctcaattggaggaatctgacatcgatatggttatt
ggcgcatctgcagattctgtgatgatggttgaaggcgagatgaaagaaatttcagaagaa
gaaatggtagaggcgattaaatttgcccacgaagccattaaaaaacaaattgatgcccaa
ataaggttggctgaggctgttggaagaaaagaagttcgtgaatatgaaccagagcgcgaa
gatgatgatttgaaaaagaaaatacacgagttggcctacgataaagtgtatgccgtagca
aaatctgcttccgcaaaacacgaacgtagtgcttcttttgatgcaattaaggaggaaatt
aaagcaactttttctgaagaggaattggaagattttggagatttaatttcaaaatattat
tacaaagcagaaaaagctgccgttcgcgatcttaccttaaacgaaggtttgcgcttggac
ggaagaaaaacagacgagattcgcccaatatggtgtgaggttgattaccttccttcaacc
cacggttcggctatttttacacgtggtgaaacacaagctttggcaaccgttactttggga
acttctcgcgaagcaaaccaaattgacatgccatcttttgaaggcgaagagaccttctat
cttcactacaacttccctcctttctcaactggtgaggcccgcccaatccgcggtacttcc
cgtagagaggttggtcacggaaacttggcgcaacgcgcattgaaaggaatgattcctgca
gattgcccttataccgttcgtgtggtttcagaggttttggaatctaatggttcttcttct
atggcaacggtttgcagcggaacaatggcgttgatggatgctggggttcaattgaaaaaa
ccagtttcagggattgcaatgggattgatttctgatggtgaaactggaaaatacgcagta
ctttcagatattttgggtgatgaagatcacttgggagatatggactttaaagttaccgga
acggctgacggaattaccgcttgccaaatggacattaaagtgaaaggcctttcctatgaa
attttggtaaatgcgctgaaacaagctgctgccggtagacttcatattcttgaaaaattg
acggataccattgcaacaccaaatgcagatgtgaagcctcacgctccaaaaatggttacc
gttactattccaaacgaatatattggtgctttaattggacctggcggaaaagtaattcaa
gagcttcaaaaagctacaaagactacaattgtaatcaacgaagatcctgttaccgaagaa
ggtatcgtggaaattcttggaacaaaccaagaaggaattgatgccgtattggcgaagatt
gattcgcttacattcaagccagaagtgggtagtgtttacgaagtgaaagttattaagatg
cttgattttggggctgttgtggagtacacagacgctcctggaaacgagaccttgcttcac
gtgagcgaacttgcttgggaacgtacagaaaatgtatccgatgttgtaaatatgggtgat
gtgtttgatgtgaaattccttggtttcgatcctagaaccaaaaaagataaagtttcaaga
aaagcattgttgccaaaaccggaaggctacaaagaacgcccaccacgcgacgacaaccga
agcggcggacgtgataatcgtggacgcgacaaccgtggccgtgacaatcgcgatagagat
agaaagagagattaa
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