Aequorivita iocasae: JK629_04525
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Entry
JK629_04525 CDS
T07991
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aic
Aequorivita iocasae
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aic03032
]
JK629_04525
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_04525
Enzymes [BR:
aic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JK629_04525
DNA replication proteins [BR:
aic03032
]
Prokaryotic type
DNA Topoisomerases
JK629_04525
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JK629_04525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
T3SchapCesA
YebG
Motif
Other DBs
NCBI-ProteinID:
QQX77539
LinkDB
All DBs
Position
960217..961206
Genome browser
AA seq
329 aa
AA seq
DB search
MYKRKRHGKGFTYKYKNGKTITDPDTRKWIKSLVIPPAWTEVEINEDPNADLLVTGRDDK
NRKQYLYHPKYTERQNAKKFDRIVDFADQLEHMRRVTGQHLRKKKLTREKVLATMLRLLE
VAFFRPGSEAYAKENDTYGLTTMRSKHLTIKGDELIFSYNGKSGQDQEKHIVDKKLAKIV
QEIDDMPGYEIFKYVDENDQIVDVKSDDLNAYIHEVMGEDFSAKDFRTWAGTLIAAIALD
ELGVVKEKHQKKLDQNIKEAVNQVSEKLGNTPSVARSSYIDPRIIENYMEGRTLQYFEKE
ISRMLRKAENLSKEEIGVLCMLRERFKKK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaagaaaaagacatggtaagggttttacatacaagtataaaaatggcaaaacc
atcactgatccagacacacgtaagtggataaaatcgcttgtaattcctccagcctggacc
gaagttgaaataaatgaagaccccaatgcagatctattagtaacggggagagacgataaa
aatcgtaaacagtatttataccatcccaaatataccgaacgccaaaatgctaaaaaattt
gaccgtattgtcgattttgccgaccaattggaacatatgaggcgtgtgaccggtcagcat
cttcgcaaaaaaaaattaacacgggaaaaagtacttgctaccatgcttcggctattggaa
gttgctttttttagacccggtagcgaagcatatgccaaagaaaatgatacgtacggactt
acaaccatgcgaagcaaacatcttaccattaaaggggatgaacttatcttttcctataac
ggaaaatctgggcaggatcaggaaaaacatattgtcgacaaaaagttagcaaaaattgtt
caagaaattgatgatatgccaggatatgaaatttttaaatatgtagacgaaaatgatcaa
atagtggatgtaaaaagtgacgatctcaatgcctatattcacgaggtaatgggcgaggat
ttttcagctaaagattttagaacctgggccggcactcttattgccgcaattgctttggat
gagttgggcgtggttaaggaaaagcatcaaaaaaaattagaccaaaatataaaagaagct
gtaaaccaagtttcagaaaaacttggaaacactccttcagtagcacgaagttcctatata
gacccacgcattattgagaactacatggaaggcaggacattgcaatattttgaaaaagaa
attagccgaatgttacgaaaagcggaaaatctatccaaagaagaaattggggttttgtgc
atgcttcgtgaacgcttcaagaaaaaataa
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