Aequorivita iocasae: JK629_06165
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Entry
JK629_06165 CDS
T07991
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aic
Aequorivita iocasae
Pathway
aic03030
DNA replication
aic03410
Base excision repair
aic03420
Nucleotide excision repair
aic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JK629_06165 (polA)
03410 Base excision repair
JK629_06165 (polA)
03420 Nucleotide excision repair
JK629_06165 (polA)
03440 Homologous recombination
JK629_06165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aic03032
]
JK629_06165 (polA)
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_06165 (polA)
Enzymes [BR:
aic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JK629_06165 (polA)
DNA replication proteins [BR:
aic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JK629_06165 (polA)
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JK629_06165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JK629_06165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
Rtf2
HHH
Motif
Other DBs
NCBI-ProteinID:
QQX77843
LinkDB
All DBs
Position
complement(1321034..1323874)
Genome browser
AA seq
946 aa
AA seq
DB search
MSTQKRLFLLDAYALIFRGYYALIKNPTINSKGQDTSAIMGFLNSLFDVIRRERPDHLAV
CFDKDGSAERTEMFADYKANRDETPDVIRQSIPIIQEIIKAMHIPCVELSGLEADDIIGT
LAQQAEKQGYQVFMVTPDKDFGQLVTENIFMYRPARMGNAIEIWGIPEVQKRFGVERPEQ
VIDYLGMMGDASDNIPGLPGVGEKTAKKFIAEFGSMENLLANTDKLKGKMKEKVEENAEL
GLLSKKLATICTTCDVTFNEKDYELSMPDGEKVQQIFEELEFRRLKEQFLKLFSEEGASE
KVTQISNSESAKKATSASAGSGQFSLFGSDGDTSEEIKNYNSRATIENTEHFYQTVQPGM
GTKLFLQNLMKQQSVCFDTETTSLNPLEAELVGIAFSWEKGKGFYVPFPENKEETQQILE
ELQPFFENETIEKIGQNLKYDIKVLAKYNISVKGKLFDTMLAHYLINPDMRHNMDVLSET
YLNYTPVSITELIGKKGKNQLNMRDVAIEKQTEYAVEDADVTFQLKEHFEKELGEANTQK
LFDEIEVPLLRVLAAMELEGINLDEEFLKKLSNELDKDILQLEKSIYEEAGEEFNIASPK
QLGDILFGKMKLIEKPKKTKTGQYSTSEDVLSYLAKDHKIIRDVLEYRGLTKLKSTYVDA
LPDQVEKTTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGREVRKAFIPRNDDYVLM
AADYSQIELRIIAALSEEDNMIEAFKNGEDIHASTAARVFNIPLSEVTREQRSNAKTVNF
GIIYGVSAFGLSNQTDLSRSEAKDLIDTYYKTYPKLRNYISEQIQFAREHGYVQTVLGRR
RYLKDINGSNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLEKENYKSKMLLQVHD
ELVFDAYKPELEKLKTMVKHEMENAYTLSVPLDVDLGVGENWLEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccaaaaacgccttttccttcttgatgcatacgcccttatttttcgcgggtat
tacgcacttataaaaaatccaaccattaatagcaaagggcaagacacctctgccattatg
ggttttctgaattccctttttgatgttatccgccgcgagcgtcccgatcatttggccgtt
tgttttgataaggatggaagtgccgaacgcaccgaaatgtttgcagattataaagcaaat
cgtgacgaaacgcccgatgttatccgtcaatctatcccgataattcaagaaataatcaaa
gctatgcacattccttgtgtggagctttcaggtttggaggctgatgatattattggaacg
cttgcgcaacaggcagaaaaacaaggttatcaggtttttatggttacgcccgataaggat
ttcggccaattggtaaccgaaaatatttttatgtaccgccctgcgcgtatgggtaatgcc
atcgagatttggggaatccccgaagtgcagaaacgttttggtgtagagcgtcccgaacag
gtgattgattatttaggaatgatgggcgatgccagcgataacattcccggactgcctggt
gtgggtgaaaaaacagcaaagaagtttattgcggaatttggctctatggaaaatcttttg
gcaaataccgataagctaaaaggtaaaatgaaagaaaaagttgaagagaatgccgaactc
ggtctgctttcaaaaaagctcgctacaatctgtactacatgtgatgtaacgtttaatgaa
aaagattacgagctgtcgatgcccgatggcgaaaaagtgcagcagatttttgaagaactg
gaattccgaagactaaaagagcagtttttaaaactgttttcagaagaaggcgcttcggaa
aaagtgacacagatttcaaattccgaaagtgcaaaaaaagcaacttctgcttccgcagga
agtgggcaattttccctttttggcagtgatggagacacttccgaagaaataaaaaattac
aactcacgtgccaccattgaaaacacagaacatttttaccaaaccgttcagccgggaatg
ggaactaaattgtttcttcagaatttgatgaagcagcaaagtgtatgttttgataccgaa
accacaagtttgaatccgttggaggcagaactggttggaattgctttttcttgggaaaag
ggaaaaggattttacgttccttttcctgaaaacaaagaggaaacacagcaaattttggag
gagcttcaacctttttttgaaaacgaaaccattgagaaaattggacaaaatctgaagtat
gacatcaaagttttggcgaaatataatatttcggtaaaaggaaaattgtttgataccatg
ctcgcgcattatcttataaacccagatatgcggcacaatatggatgttttgagcgaaacg
tatttgaattatacacccgtttccattacggaattgattggcaaaaaaggcaaaaaccaa
ttgaatatgcgggacgttgccattgaaaaacagactgaatatgccgttgaggatgccgat
gtaacatttcaactaaaggaacatttcgaaaaagaactgggtgaagccaacacccaaaaa
ctttttgatgagattgaagtcccgcttctgcgggttttggcagccatggaattggaaggc
atcaatctggacgaggaatttctgaaaaaactttccaacgaattggacaaagacattctt
caacttgaaaaaagtatttatgaagaagctggagaagaatttaacattgcatcaccaaag
caattgggcgatattcttttcggaaaaatgaagttgattgaaaaaccgaaaaaaaccaaa
acgggacagtattcaacctcagaagatgtgctttcctatttggcgaaagaccataaaata
atccgtgatgttttggaatatcgcgggcttacaaaattgaaaagcacttatgtggacgcg
cttccagaccaagttgaaaaaactacaggtcgcgtgcacacagattatatgcaaaccgtt
gcagccacgggccgtttgagcagtaacaatccaaacttgcaaaatatcccaattagaact
gagcgtgggcgcgaagttcgaaaagcatttattccaagaaatgacgattatgttttgatg
gctgcggattattcgcaaatagaacttcgtattattgccgcattgagcgaagaagacaat
atgattgaagctttcaaaaatggcgaagatatccacgcttctaccgcagcaagggtcttc
aatattcctttaagtgaagtgacccgcgaacaacgaagcaacgccaaaaccgtgaatttt
gggattatttatggggtttccgcttttggtctcagcaatcagactgacctttcccgttct
gaggctaaagatttgatagacacttattacaaaacctatccaaaacttcgaaattacata
agcgaacaaattcaatttgcacgtgaacatgggtatgtacaaacggttttgggaagaaga
cgctatttaaaagacattaacggaagcaaccaagtggttcgtggcgcggcggagcgaaat
gccgtaaatgctccaatacagggaagtgccgcagacattattaaaattgctatgatcaac
atccacaaaaaattagagaaagaaaactataaaagtaagatgctgcttcaagtccatgat
gaattggtctttgatgcctataagcctgagctcgaaaagctaaaaaccatggttaaacac
gaaatggaaaatgcctatacgctgagcgttccattggatgttgatttgggtgtgggtgaa
aattggttggaggcgcattaa
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