Aequorivita iocasae: JK629_07535
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Entry
JK629_07535 CDS
T07991
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aic
Aequorivita iocasae
Pathway
aic03030
DNA replication
aic03430
Mismatch repair
aic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JK629_07535
03430 Mismatch repair
JK629_07535
03440 Homologous recombination
JK629_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aic03032
]
JK629_07535
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_07535
Enzymes [BR:
aic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JK629_07535
DNA replication proteins [BR:
aic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JK629_07535
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JK629_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QQX78098
UniProt:
A0ABX7DWX7
LinkDB
All DBs
Position
complement(1627235..1628698)
Genome browser
AA seq
487 aa
AA seq
DB search
MQSQLFAIIDVETTGGGIAGNRITEICIALMKEGEVVDKYTTLINPERDIPHHITTLTGI
DNEMVADAPRFFEVAEKIEAFTQDAIFVAHNVSFDYNVIRGEFRLLGQHYNRKKLCTVRL
SRKLIPGMLSYSLGRLCSTINIPHLNRHRAEGDVDATVILFQRLLSLDEDFSIINSFLNP
RSKQATLPPHIPAEQINELPEEPGIYLFKNQKHQVVYAGKAKNIKKRVLSHFYDKKTKEY
QLGQETHFIDYELTGNELVALLVESEHIRKHYPKFNRAQKWPATTYQIISYVNQRGIIQL
ALGKTKALHDSVSTFYNRTEATEKLEEICETFKLCPRFCTLQSTSEKCSHYRIKNCEGIC
EGNESVTEYNLKVQAAVKALKENKPSFAIQGKGRTKDEIAFALVAEGQYKGFGFFDRSEA
ICNIEDYEPFLKLQTATYHTHAIIRSHLKKNGERNVVYFDEPLPLTTHRIKAIKKKSSQD
TIFSEWK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcacaacttttcgcaattatagatgtagaaaccactggtggtggaatagcaggt
aaccgtattacagaaatctgtattgcattgatgaaagagggcgaagtggtagacaagtac
actacactcatcaatccggagcgcgacataccacaccacattacaaccctaacaggtatt
gacaatgaaatggttgccgatgcccctcgtttttttgaagttgccgaaaaaattgaagcg
tttacacaagacgctatttttgtggcacataacgtaagttttgactacaatgtaatccgc
ggtgaatttcggcttttgggacagcattacaatcgcaaaaaactatgtaccgtccggctt
tcacgaaagttgatccccggaatgctttcctatagtctcggaaggctctgtagcactatc
aatattccgcacctcaaccgtcaccgtgccgaaggcgatgtggatgccacggtgattctt
tttcagcgtttgctttccttggatgaagatttcagtattatcaattcctttttaaacccg
cgttccaaacaggcaacgcttccgccgcacattcccgccgagcagataaacgaactgcct
gaggagcctggcatctatcttttcaaaaaccaaaaacaccaagtggtatatgcgggaaag
gcgaaaaacataaagaaacgggtactcagtcatttttacgataaaaaaacaaaggaatat
caactgggccaggaaacacattttatagattatgagcttacggggaatgagctcgtggca
ttgcttgtggaatctgaacacatcagaaagcactatccaaaattcaacagggcacaaaaa
tggcccgccaccacctaccagataatcagttatgtaaaccaacgcggcattatacaattg
gctttgggaaaaacaaaggcacttcatgattccgtgagcaccttttacaaccgaaccgaa
gccaccgaaaaactggaagaaatctgtgaaacttttaaactgtgcccgcgcttttgtacg
ttacagagtacctcagaaaaatgctcacactaccgtataaaaaactgtgagggtatttgt
gaaggtaatgaaagcgtaacggaatataacctaaaagtgcaggctgccgttaaagcccta
aaagaaaataaacccagctttgctatacagggaaaaggaagaacgaaggacgaaattgcc
tttgccttggtagccgaaggacaatacaaaggctttggtttttttgaccgaagcgaagcc
atttgcaatattgaggattacgaaccttttttaaaattgcagacagcaacctatcacacc
cacgcaattatcaggagtcatcttaaaaaaaatggagaacgcaatgtggtttattttgat
gaaccgcttccgcttacaacgcatagaataaaggcaattaagaaaaaatcatcccaagac
actatttttagtgaatggaaataa
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