Aequorivita iocasae: JK629_08750
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Entry
JK629_08750 CDS
T07991
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aic
Aequorivita iocasae
Pathway
aic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JK629_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aic03021
]
JK629_08750
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_08750
Enzymes [BR:
aic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JK629_08750
Transcription machinery [BR:
aic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JK629_08750
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JK629_08750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Peptidase_S80
Motif
Other DBs
NCBI-ProteinID:
QQX75442
LinkDB
All DBs
Position
1879651..1880643
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFSFQKPDKVIMVNSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIDEIDNETVTISVSGNEQLKAGDFQKFIS
GFQVLNPELVLCNMDKKVNLNFEITIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENFRVEQKTDYEKLVFEIVTDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSYNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLAKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttagttttcagaagcctgataaagttataatggtaaattctaccgatttc
gaagggaaatttgaatttcgtcctttggaaccgggttacggacttaccgttggtaacgca
ttaagacgcgtattactttcctcattggaaggattcgccattacttcggttcgtatcgaa
ggcgtggatcacgaattttcaaccattgcaggagtcgttgaagatgttaccgaaattatt
ttgaaccttaaacaagttcgtttcaaaagacagattgacgaaatagataacgaaaccgtt
actatttcagtatctggaaacgagcagttgaaagcgggtgatttccaaaaattcatttca
ggattccaagtattgaacccagaattggttctttgcaatatggacaaaaaagtgaatctt
aatttcgaaatcactatcgaaaaaggtcgcggctatgttcctgctgaagagaacaaaaaa
gcaaacgctcctttgggaaccatctttacggattctatctacactccaataaaaaacgtg
aagtacagcattgaaaacttccgtgtagagcaaaagactgattacgaaaaattggttttt
gaaatcgttacagacggatcaatccacccaaaagatgctttgaccgaagctgcaaaaacc
ctgatccatcactttatgctgttcagcgatgagcgcattaccttggaggcagatgaaatt
gcacaaactgaaacttatgatgaagaatctcttcacatgcgccagttgcttaaaacaaaa
ttagtagatatggatctttcggttcgtgcgctaaactgtttgaaagctgctgaagttgat
accttgggcgacctagtatcttataacaaaaatgacttgatgaagttccgtaacttcggt
aaaaaatcgcttactgagcttgaagagcttgtaaacgtaaaaggactaaatttcgggatg
gatcttgcaaaatataaattagataaagactag
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