Aequorivita iocasae: JK629_15290
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Entry
JK629_15290 CDS
T07991
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aic
Aequorivita iocasae
Pathway
aic03030
DNA replication
aic03430
Mismatch repair
aic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JK629_15290
03430 Mismatch repair
JK629_15290
03440 Homologous recombination
JK629_15290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aic03032
]
JK629_15290
03400 DNA repair and recombination proteins [BR:
aic03400
]
JK629_15290
Enzymes [BR:
aic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JK629_15290
DNA replication proteins [BR:
aic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JK629_15290
DNA repair and recombination proteins [BR:
aic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JK629_15290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
T5orf172
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QQX76666
UniProt:
A0ABX7DSR9
LinkDB
All DBs
Position
3320619..3321998
Genome browser
AA seq
459 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKFDGHKIVDQFSSLVNPERPIQPFVVNLTGINNEM
LRQAPKFYEVAKRIIEITEDCIMVAHNALFDNRILTTEFDRLGYQFERETLCTVELAKKL
MPDMPSYSLGKLVRSLGIPLSDRHRAQGDAKATVALFKMLLAKDTSKEIITETLQKDPKR
LIEPKLLDIIENTPSEMGVYYMHNDDGKVIYIGKSKNIKKRLTQHFTSDNRKSKKIQAEV
KSVTFEKTGNELISLLKECEEIKQTKPKYNRSLRQTLFSHQLTSFVDAAGYINLKIEKAD
GRKMAITTFSNYQQAKSSLFKITEANQFCQKLTGLQTSGKTCFNYKLKECYGACIGKEPV
AEYNNRVKAFLEKNSFENQNMLIIDRGRDIEERSVILIENGSYKGYGFYNLNHQINNPEI
LKSIINPMQNNRNVQHIIQNYLRKNKVLKTVKLPSDKVS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaattttagatatagagacaacgggcggaaaatacaacgaggaaggaatcacc
gaaattgcgatttacaaatttgacggccacaaaattgtggaccagttttcaagcttggta
aatcccgaaaggcctattcagccttttgtagtaaaccttacgggtataaacaatgaaatg
ctacggcaagctccaaaattttatgaagttgcaaaacggattatcgagataacagaagat
tgtataatggtagctcacaatgcacttttcgataatagaattctcaccacagagtttgac
cgattgggctaccaatttgaacgggaaacgctctgcaccgttgaactcgcaaagaaattg
atgccagatatgccctcctacagtctgggaaagttagtgcgctccttaggaattccgctc
agcgaccgtcaccgtgcacagggcgatgctaaagctacggtggcactatttaaaatgttg
cttgcaaaagacacttccaaagaaataatcaccgaaacccttcaaaaggatccaaagcgc
ctcattgagcccaaattgcttgatattattgaaaacactccttctgaaatgggggtttat
tatatgcacaatgatgatgggaaggttatttatattggaaaaagcaagaatattaaaaaa
aggctgacacaacattttacgagtgataacagaaaatccaaaaaaattcaggcggaagta
aaatcggtaacttttgaaaaaacaggcaacgaacttatttcgcttcttaaagagtgtgaa
gaaataaaacagaccaaacccaagtataataggtcgctcaggcaaacgctttttagccat
caactcacttcttttgtagatgcggcaggttatataaatttaaaaattgaaaaagcggat
ggcagaaaaatggccattacaactttcagcaactatcaacaagcaaagtcatcgcttttc
aaaataacggaagctaaccaattttgccaaaaattgaccgggctgcaaacaagtggaaaa
acctgtttcaactataaattaaaagagtgctatggtgcttgcataggcaaggaaccagta
gctgaatataacaaccgcgtaaaggcttttttagaaaagaatagttttgaaaatcaaaac
atgctcattatagaccggggtcgcgatattgaagagcgttcagtcattttaattgaaaat
ggaagttacaaaggctatgggttttataatttgaaccatcaaataaacaatcctgaaatc
ttaaaatctattatcaaccctatgcaaaataatcgaaatgtgcagcatattattcaaaat
taccttcgtaaaaacaaagttcttaaaacagtaaagcttccctccgataaggttagttaa
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