Acinetobacter indicus: CTZ23_00020
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Entry
CTZ23_00020 CDS
T05342
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aid
Acinetobacter indicus
Brite
KEGG Orthology (KO) [BR:
aid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aid03032
]
CTZ23_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
aid03400
]
CTZ23_00020 (gyrB)
Enzymes [BR:
aid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CTZ23_00020 (gyrB)
DNA replication proteins [BR:
aid03032
]
Prokaryotic type
DNA Topoisomerases
CTZ23_00020 (gyrB)
DNA repair and recombination proteins [BR:
aid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CTZ23_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
DUF2526
Motif
Other DBs
NCBI-ProteinID:
AVH12849
LinkDB
All DBs
Position
3789..6257
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AA seq
822 aa
AA seq
DB search
MSSEDQSATQTEQTNEKAYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN
AIDEALAGHCDEILVTIHEDESVSVADNGRGIPTDIHPEEGVSAAEVILTILHAGGKFDD
NSYKVSGGLHGVGVSVVNALSSKLELTIKRAGQIHQQEYRHGDPQYPLTVVGETEETGTM
VRFWPSAETFSQTIFNVDILARRLRELSFLNAGVRIVLKDERINLEHIYDYEGGLSEFVK
YINEGKNHLNDIFHFTVQAENGIGVEVALQWNDSYQENVRCFTNNIPQKDGGTHLAGFRA
ALTRGLNSYMENENLLKKEKVVVSGDDAREGLTAIISVKVPDPKFSSQTKEKLVSSEVKP
AVEQAMNKSFSEYLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKL
ADCQEKDPALSELYLVEGDSAGGSAKQGRNRKMQAILPLKGKILNVERARFDKMISSAEV
GTLITALGCGIGREEYNPDKLRYHKIIIMTDADVDGSHIRTLLLTFFFRQMPELVERGHI
YIAQPPLYKLKKGKQEQYIKDNEALETYLISNAIDELALHVSADAPAIRGEALASVIADY
QTSQKSLSRLTLRYPASLLDGLLAQEAFKLDQVHDLDYVQAWGEQLCAYIAATQSSLRPE
LSIETFDKEDAEGQKSAIYWPRITIYVHNLPHAYLLDAGLLGSGEYARLLKNSKSWFSLI
EEGAYLQKGERKIQVNSFHQVWQHILQDSRRGMMIQRYKGLGEMNAEQLWETTMDPENRH
MLQVTIEDAIEADRMFSCLMGDDVEPRRAFIEENALNADIDA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagaagatcaatctgccactcaaacagaacaaaccaatgaaaaggcttatgat
tcctctagtatcaaagtattacgtggcctagatgctgttcgtaaacgcccgggcatgtat
atcggtgatacagatgatggtaccggtttgcaccacatggtgttcgaggtggtcgataac
gcgattgacgaagcgctggccggccactgtgacgagattctagtcactattcatgaagat
gaatcggtatctgtggctgataacggtcgtggtattccaactgacattcacccggaagaa
ggcgtatcggcggctgaggtaattctgaccatcctgcacgccggcggtaagttcgacgac
aacagttataaagtatcgggcggtctgcacggggtcggggtatcggtggtaaacgccctg
tcgagcaaactggaactgaccattaaacgtgctggtcagattcatcagcaggaataccgt
catggtgatccgcaatatccattaaccgtggttggtgaaactgaagagaccggaaccatg
gtccgtttctggccaagtgctgaaacctttagccagaccatttttaatgtcgatattctg
gcgcgccgtttacgtgagctgtcgttcctgaatgccggtgtacgtattgtcctgaaagat
gagcgtattaacctggaacatatctatgactatgaaggtggtctgtctgagttcgtgaaa
tatattaacgaaggcaaaaaccatctgaatgatattttccattttaccgtgcaggcagaa
aatggcattggggttgaagttgcgttgcaatggaatgattcttatcaggaaaatgtccgc
tgctttaccaacaatattccgcaaaaagatggcggtacccatttagccggtttccgtgcc
gcgttgacccgtggtttaaacagctacatggaaaacgaaaacctgctcaaaaaagagaag
gtggtggtttccggggatgacgcacgtgaaggtttgaccgcgattatttcggtgaaagtg
cctgatccaaaattctcttcacagaccaaagaaaaactggtgtcgagtgaagtgaaacct
gcggtcgagcaggctatgaataaatccttctcggaatatttactggaaaacccgcaagca
gccaaatcaattgccggcaagattattgatgcagcgcgtgcccgtgatgcagcgcgtaaa
gcacgtgaaatgacccgtcgtaagagcgcgctggatattgccggtttaccgggtaaactg
gccgattgtcaggaaaaagatccggctttatctgaactgtatctggtcgagggtgactct
gcgggtggttcagccaagcaaggccgtaaccgtaaaatgcaggcgattttaccgctaaaa
ggtaaaatcttgaacgtggaacgtgcccgttttgacaagatgatttcatcggcagaagtc
ggcaccttaattactgcactgggctgcggaattggccgtgaagaatataacccggacaag
ctgcgttatcacaaaatcatcatcatgaccgatgccgacgtcgatggttcgcacatccgt
accttgctgctgacgttcttctttcgtcaaatgccggagctggtggaacgtggtcatatc
tatattgcccagccaccgctgtacaagctgaaaaaaggcaagcaggaacagtacattaaa
gacaatgaagcgctggaaacctatctgatttccaatgctattgatgaactggccctgcat
gtcagcgcagatgcaccggcgattcgtggtgaagcactggcttcagtgattgccgattat
cagacttcgcaaaagagcctgagccgtttaaccttgcgttatccagccagcctgttagat
ggtttgctggcgcaagaagcgttcaagctggatcaggtgcatgatctggattatgtacag
gcctggggtgagcagttatgtgcctatatcgcggccacccaaagcagtttacgtcctgaa
ctcagcatcgaaacctttgataaagaagatgcggaaggacaaaaatctgcgatttactgg
ccacgtattaccatttatgtacataacctgccacatgcctatttgctggatgccggttta
ctcggttcaggtgagtacgcacgtttgctgaagaactcgaagagctggtttagcctgatt
gaagaaggcgcgtacttgcaaaaaggcgagcgcaagattcaggtcaacagcttccatcag
gtctggcagcatattctgcaggactcacgccgcggcatgatgatccagcgttataaaggt
ctgggtgaaatgaatgccgagcagctttgggaaaccaccatggacccggaaaaccgtcat
atgctgcaggtgaccattgaagatgcgattgaagcagaccggatgttctcgtgtttaatg
ggcgatgatgtggaaccacgtcgtgcctttattgaagaaaatgccctgaatgccgatatt
gatgcctaa
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