Acinetobacter indicus: CTZ23_04700
Help
Entry
CTZ23_04700 CDS
T05342
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
aid
Acinetobacter indicus
Pathway
aid03030
DNA replication
aid03430
Mismatch repair
aid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTZ23_04700
03430 Mismatch repair
CTZ23_04700
03440 Homologous recombination
CTZ23_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aid03032
]
CTZ23_04700
03400 DNA repair and recombination proteins [BR:
aid03400
]
CTZ23_04700
Enzymes [BR:
aid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTZ23_04700
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
CTZ23_04700
DNA replication proteins [BR:
aid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTZ23_04700
RNase H
CTZ23_04700
DNA repair and recombination proteins [BR:
aid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTZ23_04700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AVH13649
LinkDB
All DBs
Position
complement(959458..960939)
Genome browser
AA seq
493 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITETQQHKLYGGELETTNNRMELTAAIEGIQFCP
AEAKLILWTDSNYVKRGMTEWIAGWKKKNWKDVKNPDLWQKLDAICQGREIEWHWIKGHA
GHAGNEMADQLANKGADLVFAQQVKVTPVQIITEDKSAESEVIPPGTAKKKAESDWLLDD
PFGFDLDDSQLDVEVEEELLMVQEDHLSLTQHSITMTQTLSQNDTPSQNEALTETQNQSE
TAPANASSHPHIVITPATVQAYGPRQLILDTETTGFYYQDGDRIIEVGAIEMVNRKLTGS
SIHIYINPEKPVGESEVVHGISDEFLKDKPKYAEIAAVLYDYLKGAEIIAHNATFDMNFL
DMEFNRCGLGDLSAVCEVTDTLVMAKNKHPGQKNSLDALVKRYEIPARDRTFHGALLDAE
ILADVYLAMTGGQVSFDMDALSAHHEEQSGESGRRSIEMELPVILPSAAELEAHENWVKQ
FEEKHGQPCFFAK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactatatgtggatggtgcttgtcgtggaaaccctggcttgggc
ggttggggcgcatatgtcattacagaaacccaacagcacaaactttatggcggtgaactg
gaaaccaccaacaaccgtatggagctgacggcagccattgaaggcattcagttctgcccg
gcagaggccaaactgattctctggaccgattccaactatgtcaaacgcggcatgaccgaa
tggattgccggctggaaaaagaaaaactggaaagatgtgaaaaatccggacctatggcaa
aaactggatgccatctgtcagggtcgtgaaattgaatggcactggattaaaggtcacgct
ggccatgctggcaatgaaatggccgatcagctggccaacaaaggggccgatctggtattt
gcacagcaggtcaaagtgacgccggtacaaatcattactgaagataaaagcgctgagtct
gaagtcatcccgccgggcacggctaaaaaaaaagcagaatctgactggttgctcgacgac
ccttttggcttcgatctggacgacagccaactagacgttgaagtcgaagaagaactgctg
atggtgcaggaggatcatctcagcctgacccagcacagcattaccatgacgcaaaccctg
agtcaaaatgacactccgagtcagaacgaagccctgactgaaacccagaaccagagcgaa
acagcgccagcaaatgcgtcatcgcatccgcatattgtgattaccccggccacggttcag
gcttatggtccacgccagctgattctggatacggaaaccaccggtttttattatcaggat
ggtgaccggattattgaagtcggcgcaattgaaatggtcaaccgcaaactgaccggcagc
tcgattcatatttatatcaacccggaaaaaccggtcggtgaatcggaagtggtgcacggt
atttcggatgagtttttaaaagacaagccgaaatatgctgaaattgctgcagtgctgtat
gactatttaaaaggtgcggaaattattgcgcataacgccaccttcgatatgaacttcctg
gatatggagtttaatcgctgtggactaggcgatttatcggcagtctgtgaagtcaccgat
accctggtgatggccaaaaacaagcatcccggacaaaagaactcgctcgatgccttagtg
aagcgttatgaaattccggcgcgtgaccgtaccttccacggcgccttgctcgatgctgaa
attctggcagatgtctatctggccatgaccggtggccaggtgtcctttgatatggatgcc
ttgtcggcccatcatgaagaacaaagcggtgaatcgggccgtcgcagcattgaaatggaa
ttaccggtgattctgccttccgccgcagagctggaagcacatgagaattgggtcaaacaa
tttgaagaaaagcatggacagccctgcttttttgccaaataa
DBGET
integrated database retrieval system
