Acinetobacter indicus: CTZ23_08125
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Entry
CTZ23_08125 CDS
T05342
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aid
Acinetobacter indicus
Pathway
aid02024
Quorum sensing
aid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTZ23_08125
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CTZ23_08125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aid03019
]
CTZ23_08125
03036 Chromosome and associated proteins [BR:
aid03036
]
CTZ23_08125
Messenger RNA biogenesis [BR:
aid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CTZ23_08125
Chromosome and associated proteins [BR:
aid03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CTZ23_08125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AVH14262
LinkDB
All DBs
Position
complement(1678131..1678649)
Genome browser
AA seq
172 aa
AA seq
DB search
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAPAGAQGAGGFGGQGGGFGGGQGGGFGGQGGFGGQGGGFGGQGGFGGQ
GGFGGQGGFGGQGGGFGSQGGFGGQGAGFGGQASGFDNDSKFEDSQEDDNNR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcaaactttacaagatccgttcttgaattctctccgtaaagaacgtatt
ccagtttctattttccttgtaaacggtattaaattacagggtcatatcgaatcttttgac
cagtatgtggtgctattaaaaaatacagtaagccaaatggtttacaaacacgcgatttct
acagttgtacctgcacgtaatccacgtcctgctggtgcgcctgctggtgctcaaggcgct
ggtggcttcggtggtcaaggcggtggcttcggcggcggtcaaggtggtggctttggcggt
caaggcggcttcggcggtcaaggcggtggcttcggtggtcaaggcggcttcggtggtcaa
ggtggcttcggtggtcaaggtggcttcggcggtcaaggtggtggcttcggtagtcaaggt
ggcttcggcggtcaaggcgctggcttcggtggtcaagcttctggttttgacaacgactct
aaatttgaagattctcaagaagatgacaacaaccgttaa
DBGET
integrated database retrieval system
