Acinetobacter indicus: CTZ23_13550
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Entry
CTZ23_13550 CDS
T05342
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aid
Acinetobacter indicus
Pathway
aid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTZ23_13550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aid03400
]
CTZ23_13550
Enzymes [BR:
aid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CTZ23_13550
DNA repair and recombination proteins [BR:
aid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTZ23_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
NPHP3_N
AAA_30
Rit1_C
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
AVH15641
LinkDB
All DBs
Position
complement(2782987..2786703)
Genome browser
AA seq
1238 aa
AA seq
DB search
MAATPHSSPLSFQPITDMQFKGLHWIEASAGTGKTYTLSSLIVRIFLEAYLPHQVVATTF
TRAAAAELKSRIRARLVETLRYFEQCQSYTEAELQAKAQTESDPLLQKVLADYAAKPDFA
RDRLKLVIDQLDELFVGTLDSFSQKLLREFSFECGKIERADITDDAKSYVHQLIHDVLRQ
WLQAQPQQVVNYLLLQKKLKHVDAYVGIVENTLNFASAQFREVPAPELDLNQFEAAIDEL
LQLDLADVDSLSDYYLAQGQYAALVGKKWRTNQLMQHTLCEALPALLEALSQQRGYALFA
PHFEKTLKLCTDLSTKKVLNKCPDEVLTQFEQHAVIQRLKAFCQQLQQLQLDLELLDAYL
KYYLSREVKKRLPQVLQQKGETTFAQQIRSLSEALQGEQGLRFAQFVHSKYPLILVDEFQ
DTNQDQDSMLASIWRHARYYQQGCMIMVGDPKQAIYGFRGGDMLTYNKARADVQAKQGRL
YSLKYNHRSIPALVEVVDALFQRQMDFGEEVQYSLVEAGPRPHPALIDGQGENRQPLRWL
MLEDKNNEALQVAWKIRELLNQAAQQQIYLHNGQERSPLIEEDIAVLSKNHDGLDKVQYE
LERLGIRVNRPSKRSVFDSQIAKDVGAVLTAIMHPYDEAKVKRALLSRLLNFNLQRLLEL
EAHPAGLSQFMDDFDGIRSIWFEKGFLSAWQYALNLFQVWENLVAHHSRDNERVVVNLRH
LSELLSQHSEHYQGAQTLYQWYLKQLQAPSEREWELERKLSNAAGVQLMTIHQSKGLEFK
VVFLLGADKDFREVNKTLNFSTVQAVNPLTGQTEQQRLVAVNAAALLSAEDQQQHQLRAE
AEQRRLWYVALTRASHRVYALLQDQSGKSCSGLAFWRGQGSDVFQHPHCGDEALLTEKPP
RLKLQQHEPTLPLTAKTFPQQRFYPRSKTSFSALAQHLSRKQAIDALAAHIEQHSSAADE
LHQPVAVDDVEILNQPIAWIKRQFPMGTLAGNFLHEIFEHIDFQDQQDWPLEIQRRFKND
YPSLWQELRDKFSQEYPEHTEDILLSWLSAWLLDVLSTPLHSGFQLKQLAPEQHLAEFPF
YLSLSDQVLAIKRIHQLFDEYGIQMLDFHDANSARYLTGSIDLVYFDGHRYHIADYKSNF
LGADQSHYQAASVQASMSQSSYWLQAGLYLVALHRYLKVHLENYDIYQHLGGASYLYLRG
MNGQAAQGVYHWKPPVEFILRLDALLGNPAVDQLGKIA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggccgctactccacattcttcgccactatctttccagcccattactgacatgcagttc
aaggggctgcactggattgaagcttcggctggcaccggcaagacctataccttatccagc
ctgattgtgcggatttttctggaagcctatttaccccatcaggtggtggcgaccaccttt
acccgcgccgccgcggccgagctgaaaagccggattcgcgcacgtctggttgaaaccctg
cgttattttgaacagtgccagtcttatactgaagccgaactgcaggccaaggcccagact
gaatctgatccactgttgcaaaaagtgctggcggattatgctgccaaaccggactttgcc
cgtgaccggctcaagctggtgattgaccagctggatgaactatttgtgggtaccttagac
agttttagccagaagttattgcgagaattcagttttgaatgcggcaagattgaacgtgcc
gatattaccgatgatgccaaaagttatgtgcatcagctgattcatgatgtgctgcggcaa
tggctacaagcccagccacagcaggtggtgaattatctgctgttgcaaaagaaactcaag
catgtcgacgcctatgtgggtattgttgaaaataccctgaattttgcctcggcccagttt
cgtgaagtaccggcgcccgaactggatttaaaccagtttgaagcagccattgatgagctg
ttacagctggatctggccgatgtcgacagcctgagcgactattatctggcgcagggccag
tacgctgcactggtcgggaaaaagtggcgcaccaatcagctgatgcaacacaccttatgc
gaggctttgccggcactgctagaggcgttgtcccagcaacgtggctatgccttgtttgca
ccgcattttgaaaaaaccttaaagctgtgtaccgatttatccaccaaaaaagtgctgaac
aaatgcccggacgaggtgctgacgcaatttgaacagcatgcggtgattcaacggctaaaa
gctttctgccagcagttgcagcagctgcagctggatttagagctgctggatgcctatctc
aaatactatttaagccgcgaagtgaaaaaacgcctgccgcaggtgttgcagcaaaaaggt
gaaaccacctttgcccagcagatccgcagcctgtcggaagccttgcagggcgagcaggga
ctgcgttttgcccagtttgtgcacagtaaatatccgttgattctggtcgatgaatttcag
gacaccaaccaggatcaggacagtatgctggccagtatctggcgtcatgcccgctattat
cagcagggctgcatgattatggttggtgatccaaaacaggccatttacggtttccgcggc
ggtgatatgctgacctataacaaggcccgggccgatgtacaggccaaacaggggcgcctg
tatagcctgaaatacaatcatcgttctattccggctctggtggaagtggtggacgccttg
ttccagcgccagatggattttggtgaagaggtgcaatatagcctggtagaagccggacct
cgtccccatccggccttaattgacgggcaaggggagaaccggcagcccttgcgctggtta
atgctagaagacaaaaataatgaagcattgcaggtggcctggaaaatccgggagctttta
aatcaggcggcgcagcagcagatctatctgcacaatggtcaggagcgcagcccgctaatt
gaagaagatattgcagtgctgtccaaaaaccatgacgggctggacaaggtgcagtatgaa
ctggagcggctcggaatccgggtgaaccgtccatccaaacgcagtgtgtttgacagccag
atcgccaaagatgtgggggcggtgctgaccgcaatcatgcatccttatgatgaagccaaa
gtcaaacgggccttgttaagccgcctgctgaattttaatttacagcgcttactggaactg
gaggcccatccggccggcttgagccagtttatggatgattttgacggcatccgcagcatc
tggtttgaaaaaggctttttaagtgcctggcaatatgccctgaacctgtttcaggtctgg
gaaaatctggttgcccatcacagtcgtgacaatgaacgggtggtggtcaacctgcgccat
ttaagcgaactgctcagccagcacagcgaacattatcagggtgcacaaaccctgtatcag
tggtatttaaaacagttgcaggcgccaagtgaacgcgagtgggagctggaacgaaaactg
tccaatgccgccggggtacagctgatgaccatccaccagtccaaagggttggagtttaaa
gtggtgtttttgctgggagcagataaggattttcgcgaggtcaacaaaaccctgaatttc
tcgactgttcaggcggtcaatccgctgaccggtcaaaccgagcagcagcgtctggttgcg
gtaaatgcagcagccttgctcagtgcagaggatcaacagcagcatcagctccgggccgag
gccgagcagcgccgtctgtggtatgtggcactgacccgggccagccatcgggtctatgcc
cttttgcaggaccaaagcggcaaatcctgttccggtctggccttctggcgcggtcagggc
agtgacgttttccagcatccgcattgtggcgatgaagcgctactgaccgaaaagccgcca
aggctgaagttgcagcagcatgagccgacgctaccattaacggcaaagactttcccgcag
cagcgtttctatccgcgcagtaaaaccagttttagtgccctggcccagcatttaagccgt
aaacaggcgattgatgcgctggcggcgcacattgagcagcacagcagtgccgctgatgag
ctgcatcagccagtagcggtcgacgatgtcgaaatcctgaatcagccgattgcctggatt
aaacgccagttcccgatgggcacgctggccggtaatttcctgcatgagatttttgaacac
attgattttcaggatcagcaggactggccgctggaaatccagcgtcgttttaaaaatgat
tatccttccttgtggcaggagctgcgggacaagtttagtcaggagtatccggagcatacg
gaggacatcttgctgagctggctgtcggcatggctgcttgatgtgctgagtacaccgctg
cattcaggctttcagttaaaacagctggcacccgagcagcatctggcagaatttccgttt
tatctgtccttgtccgatcaggtcttggcaatcaagcggattcatcagctgtttgatgaa
tatggcattcagatgctggattttcatgatgccaattcggcgcgctatttaaccggctcg
attgacctggtgtattttgatggccaccgttaccatattgccgactataaaagtaacttc
ttgggcgccgatcagtcgcattatcaggcggcctcggtgcaggccagcatgtcacagtcc
agttactggctgcaggccggtctgtatctggtggccctgcatcgctacctgaaagttcat
ctggaaaattacgatatttatcaacatttaggcggagccagctatttgtatttgcgcggc
atgaacggtcaggccgcgcagggcgtgtaccattggaaaccgccggtcgagtttattttg
cgactggatgcactgttggggaatccagctgtcgatcaactggggaaaattgcctaa
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