Arcobacter iocasae: LXN10_00220
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Entry
LXN10_00220 CDS
T11121
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aie Arcobacter iocasae
Brite
KEGG Orthology (KO) [BR:
aie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aie03032
]
LXN10_00220
03036 Chromosome and associated proteins [BR:
aie03036
]
LXN10_00220
03400 DNA repair and recombination proteins [BR:
aie03400
]
LXN10_00220
DNA replication proteins [BR:
aie03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LXN10_00220
Chromosome and associated proteins [BR:
aie03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LXN10_00220
DNA repair and recombination proteins [BR:
aie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LXN10_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HTH_78
Motif
Other DBs
NCBI-ProteinID:
XHE61631
LinkDB
All DBs
Position
42436..42711
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAEFIDAVAAKAGLSKKDAKCAVDSVLETITETLVKKETVSFIGFGTFSTAARAARTA
KVPGTDRTVDVKATTVAKFKVGKALKEAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctgaatttatcgacgcagtagcagcaaaagctggattatctaaaaaagac
gcaaaatgtgcagttgattctgtattagaaactattactgagactttagtaaaaaaagaa
actgtaagtttcatcggattcggaacattctctacagctgctagagctgctagaactgca
aaagtgcctggtacagatagaactgttgatgttaaagctactactgtagctaaatttaaa
gttggtaaagctttaaaagaggctgttgctaaataa
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