Arcobacter iocasae: LXN10_00360
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Entry
LXN10_00360 CDS
T11121
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aie Arcobacter iocasae
Pathway
aie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LXN10_00360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aie03400
]
LXN10_00360
Enzymes [BR:
aie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LXN10_00360
DNA repair and recombination proteins [BR:
aie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LXN10_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
HHH_RecD2
AAA_19
UvrD_C_2
OB_YrrC
Viral_helicase1
SH3_13
HHH_5
PIF1
PhoH
AAA
Ribosomal_S13
Mg_chelatase
AAA_22
AAA_14
UvrD_C
AAA_16
ABC_tran
T2SSE
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
XHE61658
LinkDB
All DBs
Position
complement(69508..71790)
Genome browser
AA seq
760 aa
AA seq
DB search
MQDENKSFKLSGILKKVLFSNKDTGFCIAVLDNDQKICGTYFDTDIEKIVGENIVLTGNW
VTHKKYGIQFAFDTLELKEQELYFFLTKIVKGIGRKVALELLEKYSEEELVEVLNNKPEE
LLNFKGIREKKLTTIKSSWQKFKHLRELGSFLSKFGVTSNLITKIYSEFSEVENLIEVIK
ENPYVLIRIKGIGFKRADEIAKALGIDERSDFRIMACLNYTLREYCDNNGNSSIDKYHLF
RLLDEALRFQNEEMLYENAIAKMELDEDIYKTKENRYAPSMLYFAEKRVLEFFKARENDM
YLKKIVSNITEYLDKKEKTLGFTLSPEQRKAVELINEGHKTLFLIGYAGTGKSTSSRAIL
ELLQEINSYDDIIAIALSGIASQRIADTTGYNSSTIQSLFVKHKENEHFPYKVILLDEAS
MVNSVMFYQIISKIGQDTIFIIVGDDGQLPAIGAGNILSDSIKYELAPICKLTKIYRQNE
NQAIAVIANEIRQGNVPEYNGNYEDFKFMDVSISNYYASKNSLGQGEFSNLRGQNSEMIL
SLILNISSAYIKEFYKLIKAKDISKALILFQIITPMKGGMLGAENLNIQLQKVFNSSREE
SKQTKLYEYKLSDKVIHIKNENMRAQTMQMYRTGSSDYLERRVFNGQLGLIIKLDFDENK
CIVLYPNDDMVVFYDFDDLDSLLSLAYCLTIHKTQGMEYDNALIPMSFSHYIMHNTKLLY
TAITRAKSMCYIVGEEDAFKGACKRIETTKRESVINDLLS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgagaataaaagttttaaactttcaggaatattaaaaaaagtactattttcg
aataaagatacggggttttgtatagcagtattggataatgaccaaaagatatgtggaaca
tattttgatactgatattgaaaaaattgttggtgaaaatattgttttaacgggtaattgg
gtcactcacaaaaaatatggaatccaatttgcctttgatactttagaattaaaagagcaa
gaactttatttctttttaacaaaaatagttaaaggaatagggcgaaaagtagccttagaa
ctcttggaaaagtactcagaagaagaacttgtagaagttttaaataacaagccagaagag
cttttaaacttcaaagggataagagagaaaaaactaacaactataaaatcatcatggcaa
aagtttaaacacttaagagaacttggttcttttttatcaaagtttggagttacatcaaat
cttattacaaagatttactcagagtttagtgaagtagaaaatctaattgaagtgattaaa
gaaaatccatatgtattgattcgtataaaaggtataggatttaaaagagctgatgaaata
gcaaaagccttaggaatagatgaaagatcagattttagaattatggcttgtttaaattat
acattaagagagtattgtgataataatggaaactcttcaatagataagtatcatcttttt
agattattagatgaagctttgagattccaaaatgaagagatgttatatgaaaatgcaata
gcaaaaatggaacttgatgaagatatttataaaacaaaagagaatagatatgctccatct
atgttatattttgcagaaaaaagggttttagagttttttaaagctagagaaaatgatatg
tatttgaaaaaaatagtttcaaatataactgaatatttagataaaaaagagaaaacttta
ggttttactttaagtccagagcaaagaaaagcagtagaacttataaatgaaggtcataaa
acactatttttaataggttatgcaggaacagggaaatcaacatcaagtagggcaattctt
gaacttcttcaagagataaactcttatgatgatattatcgctattgctttaagtggtatt
gcctctcaaagaatagcagatactacaggctataatagctcaactatacaatcccttttt
gtaaaacataaagagaatgaacatttcccttataaagtaatattacttgatgaagcttca
atggtaaattctgtgatgttttatcaaatcatttcaaaaattggtcaagacactattttt
ataatagtaggagatgatgggcagttaccagctattggtgctggaaatatattaagtgat
tctataaaatatgaactagcacctatttgtaagcttacgaaaatatatagacaaaatgaa
aaccaagcaattgcagttattgcaaatgaaattagacagggaaatgtgccagaatataat
ggaaattatgaagattttaaatttatggatgtatctatatcaaattattatgcttcaaaa
aactctttagggcaaggagaattttcaaatttaagaggtcaaaattctgagatgatatta
agtttgatattaaatatatcaagtgcatatattaaagaattttacaaattaattaaggct
aaagacatatcaaaagcgcttattctttttcaaataattacccctatgaaaggtggaatg
ttaggtgctgagaacctaaatattcaattacaaaaagtatttaatagctcaagggaagag
tcaaaacaaacaaaactttatgaatataaactaagtgataaagtaattcatataaaaaat
gaaaatatgagagcacaaactatgcaaatgtatagaacgggttctagtgattatttagaa
agaagagtttttaatggacaattgggacttataattaaacttgattttgatgagaacaaa
tgtattgttttatatccaaatgatgatatggtagtattttatgactttgatgatttagat
tcacttttatcccttgcttattgtttaactattcataaaacccaaggtatggagtatgat
aatgcccttattccaatgagcttctcacactatattatgcacaatacaaagctattatat
acagcaattactagggctaaaagcatgtgttatatcgtaggagaagaggatgcttttaag
ggtgcttgtaaaagaatagagactacaaaaagagaatctgtaataaatgacttgttaagc
taa
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