Arcobacter iocasae: LXN10_13375
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Entry
LXN10_13375 CDS
T11121
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aie Arcobacter iocasae
Pathway
aie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LXN10_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aie03021
]
LXN10_13375
03400 DNA repair and recombination proteins [BR:
aie03400
]
LXN10_13375
Enzymes [BR:
aie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LXN10_13375
Transcription machinery [BR:
aie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LXN10_13375
DNA repair and recombination proteins [BR:
aie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LXN10_13375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
XHE61150
LinkDB
All DBs
Position
2671989..2672987
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFADTPFLPTEVEIEAISETEAKISAYPFESGFAITLAHPLRRLLLSSSVGYSPIAVK
IEGASHEFDSLRGMLEDIAIFIINLKNIKFKILSDENQVEVEYSFNGPKEIKGSDLVNSD
VEIVSPEAHLATINADCNLTFSVIIQKGIGYMPSEDIRDMVSSDYIPLDAFFTPVKKVVY
DIEKMLVEDNPNFEKAVFTVQTNGQITPINAFKEAVSVMYSQMSVFNKVFDLSEVTVSDS
TEEPVELKDLIVKIDDLNLSARSFNSLDRAGLKYLGELVLMSEVEVKNIKNLGKKSYDEI
ADKLASLGFPVENTLPENIASALRRKLEQFKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgcagacactccatttttaccaacagaagttgaaatcgaagcaatcagt
gaaactgaagcaaagatttctgcatatccatttgaaagtggttttgcaattacattagcg
caccctttaagaagacttcttctatctagctcagttggatactctccaattgcagttaaa
atagaaggggcaagccacgagtttgattctttaagaggtatgctagaagatattgctatt
tttattatcaatcttaaaaatattaaatttaaaattctaagtgatgaaaatcaagtagaa
gttgaatattctttcaacggacctaaagaaattaaaggttctgacttagtaaactctgat
gttgaaattgtaagtccagaagctcatttagctacaatcaatgctgattgtaacttaact
ttctctgttattattcaaaaaggtattggttatatgccttcagaagatattagagatatg
gtttctagtgattatattccacttgatgctttctttactccagtaaaaaaagttgtttat
gatattgaaaaaatgctagtagaagacaaccctaactttgaaaaagctgtatttacagtt
caaacaaatgggcaaattacaccaatcaatgcttttaaagaagctgtttctgtaatgtat
tctcaaatgtcagtattcaataaagtattcgatttatctgaagtaacagttagcgattca
acagaagaacctgtagaattaaaagatttaattgttaaaattgacgatttaaatttaagt
gctagaagttttaactctcttgatagagctgggttaaaatacttaggtgaattagtactt
atgagtgaagtagaagttaaaaatattaaaaacttaggaaaaaaatcttatgacgagatt
gctgataaattagcatctttgggattcccagttgaaaatacacttccagaaaatattgca
tcagctttaagaagaaagctagagcagtttaaagcataa
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