Aurantivibrio infirmus: NBRC116181_19640
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Entry
NBRC116181_19640 CDS
T11901
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
aif Aurantivibrio infirmus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
5_3_exonuc
zf-C2H2_ZFAND2
HyaE
Motif
Other DBs
NCBI-ProteinID:
BFR64421
LinkDB
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Position
complement(2284150..2286207)
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AA seq
685 aa
AA seq
DB search
MKKAADKNPSRKISTTDESKILSEILSLKETLNEHNYRYYVLDEPDLPDSEYDRLMKQLQ
TLERKHPQFISPDSPTQRVGGEPLSAFEQIKHELPMLSLDNAFSDQELEDFDRRIKERLK
FEGDIEYACEPKLDGIAVSLLYVNGILERGATRGDGETGENITQNVKTIASIPLKMRGKN
FPKVLEVRGEIYMPLTVFNEINEAAKKNQQKVFVNPRNAAAGSLRQLDSKITASRRLEMC
AYSVGLVEDGELPEKHSNILAALQTWGFKINDKSQVAKNIGACLKYYQDLEKQRAKLGYD
IDGIVYKVNQIDKQKKLGFVSKAPRWAIARKFPAQEELTTLLNVEFQVGRTGAITPVARL
QPVFVGGVTVSNATLHNQDEINRLDIRIGDSVIINRAGDVIPKVVSVVKTKRPKNARVVE
FPTHCPVCNSPVETVPGEAVARCTGGLICEAQRKEAIRHFASRRAMDVDGLGDKIVEQLV
DEKLIGSVADLYKLEVATIADLERMGEKSAKNLVDALEKSKSTTLARFLFALGIREVGET
TAKNLANALGNLDSIMASDANKLQEINDIGPVVAHFIEEFFQQNENIEIINELRAVGVHW
DDIEVDASSLPLLGRTYVITGTLESISRDEAKDKLLALGAKVSGSVSSKTYALIAGTGGG
SKRSKAEALGIPVVDEAALLDLLGE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcagcagataaaaatccttctagaaaaatatccacgacagacgaatcaaaa
attttgtctgagatcctatccctcaaagaaacattaaacgaacataattatcgctattac
gtattggatgagcccgatctgcccgattcggaatacgatcgtttgatgaaacagttgcaa
acgctagaacgaaaacacccccaatttatttctcctgattcacccacccagcgtgtagga
ggtgagcctcttagcgccttcgaacaaataaaacatgaattgccaatgctgtctttggac
aatgctttctctgatcaagagttggaggattttgatcggaggatcaaagaaaggcttaaa
tttgaaggcgatattgagtacgcctgtgagccaaaattagacggaatcgccgtgagttta
ttgtacgtaaatggaatcttagagcgcggtgcgacacggggagatggtgaaaccggcgag
aatattacacagaatgttaaaactattgcgtctattcctttaaagatgcgcggaaaaaac
tttccgaaagtgttagaagtacgaggtgaaatctatatgcctcttacggtttttaatgag
atcaatgaagcggcaaaaaaaaatcaacagaaagtttttgttaatcctcgcaacgcggct
gctggaagtttgcgacagctcgattctaaaattaccgcaagtaggcgtttggagatgtgt
gcttatagtgtcggtttagtagaagacggcgagctacccgaaaagcacagtaatattctt
gcagcgttgcaaacctggggttttaaaataaatgataaaagtcaggtcgccaaaaatatt
ggtgcttgcctaaaatattaccaagatctagaaaaacaaagagctaaactcggatacgat
atcgatggtattgtttataaagttaatcagattgataaacaaaaaaaactgggatttgta
tctaaagcaccgcgctgggcgattgctcgaaaatttcccgcgcaggaagaattaacgaca
ttgttgaatgtcgagtttcaagtaggccggactggtgcgattaccccggtggctcgtctt
cagccagtatttgttggtggagtcactgtgtcgaatgcaactttgcacaatcaagatgaa
atcaaccgcttagacattcgtatcggggactcagtgattatcaatagagctggagatgtt
attccgaaggttgtttctgttgtaaaaactaaacgccccaaaaatgctcgcgttgtagaa
tttccaactcattgcccggtttgtaattcgccggttgagactgttcctggcgaagctgta
gcacgttgtaccggcggactaatatgtgaggcgcagcgcaaagaagcgatacgtcatttt
gcctcacgtcgcgcaatggatgttgacggcttgggagacaagatcgttgagcagcttgtc
gacgaaaaattaattggctcagttgctgatctttataagttggaggtggcgacgattgca
gatttggagcgaatgggagaaaaatctgcaaagaatcttgtcgatgctttagagaaaagc
aaatcaactaccttggcgcgctttctatttgccttgggtattagagaggtaggggaaaca
actgccaagaatctcgccaatgcgcttggaaatttggattcgataatggcctcagacgcg
aataaacttcaagagattaatgatattggcccggtggtcgcgcattttattgaagagttt
tttcaacaaaatgaaaatatagaaattataaatgagttacgggcggtgggagttcattgg
gacgacattgaggttgacgcaagctcgttgcccttgctcgggcgaacgtatgttattacg
ggtactttagagtcaatatcaagagatgaagctaaagataaattgttggcacttggcgcc
aaggtgtccggtagcgtgtcgagtaaaacctatgctttaattgcgggaaccgggggcggt
tcaaagcgctctaaggccgaagcactaggtattccagttgtcgacgaggccgcattgttg
gatttgttaggggaatag
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