KEGG   Auritidibacter ignavus: QDX25_00440
Entry
QDX25_00440       CDS       T09017                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aig  Auritidibacter ignavus
Pathway
aig03420  Nucleotide excision repair
aig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QDX25_00440
   03430 Mismatch repair
    QDX25_00440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aig03400]
    QDX25_00440
Enzymes [BR:aig01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QDX25_00440
DNA repair and recombination proteins [BR:aig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QDX25_00440
   MMR (mismatch excision repair)
    Other MMR factors
     QDX25_00440
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 DUF6827
Other DBs
NCBI-ProteinID: WGH81687
LinkDB
Position
91017..94601
AA seq 1194 aa
MEPLAAQPQRNTWGDVRFSAEELADILQSAKPPQQRMYPTKQQRAVIEYGPDPLLVVAGA
GSGKTRTMTDRVIWLTANGFVRPEEILGVTFTRKAAGELAARVNAAIENLASHESLGLTL
DRHDPGQASVSTYHSYANALVADYGLRIGVEPDSEMIGEARSFQIIAEIVANWEADVSEL
DFTESSLISAVKKLAAEANEHLVKPHEIKEHVIEILESGQRLDTGAKRPKYATEIFNSLR
VKMTMADIVARYAQVKKDHNLMDYGDLVYYAQLIASTIPEAAASEREKYKVVLLDEFQDT
SHAQMMLFSSLFGPQSSQGAGHCVTAVGDPNQSIYGFRGASAGQLGLFPEYFPAVRRADD
DRVDTRAPADILPLSVAWRNRERILRGANAIIGQLDGEPTTGRPVPVQELSAGVTGEPGR
VVINWFKDSEDEARTLADTVADCLGITDPGSNQPHHTEKSAAILCRRKADFLPLVEALEA
RGVPYEILGMTGLVEVPAVVEVLSLARVVAAPQENEALVRILSNARWRIGTADLWALNRY
ARGLVRHGRDAQPPSELRSDDPEQIWNAEKLAEALVSEDAEEVSLIEALYKLPPIEEAAH
HGFTEEGLQRLHRVADLLVSLQELRSLDLPEFFRMIARRSGIEAEVLAHPGTELSEALQH
LEALYDVVDEFSQGLNDSLTSDLSGFLAWIETAEAEEKGLALPAVQPRPGAVQLLTVHSS
KGLEWDAVFVPGLSAGKFPSEKPERWTSTSSGALPWGLRHDIPDEYQWPFDQAETLKEWS
AGAGNTTFSTKDQDRVTYHRLSENVKIRNGFEEKRLAYVAFTRPKHLLWLSGSHWVGTKK
KAVEQSEFLTIFQGLDGVETGHWVDSTDPEVVGDKNPRAEKILVSTWPVDPLDGASIYQI
NATDFYDGVYWIDDRAGKPLVRHYPRRQAVTQAAQWVTDARETSVTDIEDHELAQRVQWA
QPDEDMTQSSEVHLPSHLSASAFISLVDDPHTVAKSLKRPMPRRPIKAARTGTLVHQWIE
EHFASQRSGITGMLDFEDPVEDADQVWDEQTGVTTLRENFLNTRWAQRSPAFIEAGVETT
VGSVTIRGRIDAVFRNGGDHPDQEFDPTAQWELVDWKTGMVPSTPDDLEHKGLQLALYRL
AWSRLHDIPLANISGRFVYLAHGEERTPVNLADAEQLEALLAQALEATEPHGAD
NT seq 3585 nt   +upstreamnt  +downstreamnt
gtggaacctttagcagctcaaccgcaacgaaacacctggggagacgttcggtttagcgct
gaagaactggccgatatccttcagtccgcgaagccaccccaacagcggatgtatcccacg
aaacaacagcgcgccgtcatcgaatacggtccagaccccctcctggtggtcgctggtgct
ggctcgggcaaaacgcgcaccatgacagaccgagtcatctggctgactgccaacggtttt
gtgcgtcccgaagaaattcttggcgtcacttttactcgcaaagccgctggtgaattagca
gcacgcgtgaacgccgccattgaaaacctcgcgagccacgagtcactaggcttgactctc
gaccgccacgacccgggacaagccagcgtttccacctaccactcctatgcgaatgcgctg
gtagcagactacgggctacgcattggtgtcgaacccgattcagaaatgatcggagaggcc
cgatcattccagatcatcgccgagatcgtggcaaactgggaagctgatgtgtccgaactg
gactttaccgagagttcgttgatctcggcggtcaaaaaactcgccgcggaagccaacgaa
catcttgtgaaaccacacgagatcaaagagcacgtgatcgaaattttggagtccggccag
cgtctagacaccggggcaaaacggcccaaatacgccacggagatctttaacagcctccgc
gtgaaaatgaccatggccgatatcgttgcacgttacgcccaggtgaaaaaggaccataac
ctcatggattatggggacctggtttattatgcccaactgatcgcctccacgattcccgaa
gctgccgccagcgaacgcgagaagtataaggtcgtcctcctcgacgaattccaagacacc
tcgcacgcccaaatgatgctgttctcttcgctgttcggcccccaatcctcccagggagca
ggtcactgtgtcacagctgtgggggaccccaaccagtcgatctatggattccgaggtgcc
tccgccggtcagctgggtctttttcccgaatatttcccagccgttaggcgtgccgatgac
gaccgtgttgacacacgggctccagccgatatcttgcccctgagcgtggcatggcgaaat
agagagcgcattttgcgcggtgccaatgccattatcgggcaactggatggagaaccgacc
accggcaggcccgtcccggtccaagaactctcggcaggagtgaccggtgaacccggacgc
gtggttatcaattggttcaaagactccgaagacgaagcacgcacgctggccgacaccgtc
gcagactgcctggggattaccgatcccggctcgaaccagccacatcacaccgagaagtcg
gctgccattctttgtcgtcgcaaggcagacttcctgcctctggttgaagcactcgaagcg
cgaggagtcccctatgaaatcctggggatgacggggcttgtcgaggttcccgccgtcgtc
gaggtgctgtcgttagctcgtgtggttgccgctccgcaggaaaacgaagctctagtacgt
atcttgagtaatgcgcgctggagaatcggaacagccgacttgtgggcacttaaccgttat
gcccgaggactcgtgcgtcatggacgtgacgctcaacctccgtcggaactccggtctgat
gacccagaacagatctggaatgctgagaagctcgccgaggcactcgtctccgaagatgct
gaagaagtgtcactgatcgaagcactttataagttaccgccgattgaggaggcagcccat
cacggattcaccgaggaagggctccaacgactgcaccgtgttgcggacctattagtctcg
ctccaagagttgcgttcactggatcttccggaattcttccggatgattgcccgccgtagt
gggattgaggcagaagttctggcacatccaggaaccgaactctccgaggcactgcaacac
ctggaagccctttacgatgtcgtcgacgagttctcacaagggttgaacgactccctgacg
tctgatttgtcgggctttctggcatggatagaaaccgctgaggcagaagaaaaagggctg
gcactacccgccgttcaaccacgccccggagccgtccagttgctcaccgtccattcttcc
aaaggattggagtgggacgccgtgttcgttcccggactgagcgcaggaaaattcccgtcg
gagaaacccgagagatggacttccacctccagcggggcattaccctgggggcttcgccac
gatattccagacgagtatcagtggcctttcgaccaggccgaaaccctaaaagagtggagt
gcaggagcaggcaacaccacgttctccacgaaagatcaggatcgggtgacctatcatcgg
ttgtctgagaacgtgaagatccgcaatggattcgaagaaaagcgactagcttatgttgcc
ttcacccgccccaagcacttgttgtggctctcaggaagccactgggtgggaacaaagaag
aaagccgttgaacagtccgagttcttgaccatttttcagggactagacggggtcgaaact
ggacactgggttgattcaacagaccccgaagtcgtcggagataagaacccgcgggctgag
aagatcctggtctccacctggcctgtcgatcctctcgatggcgcatcgatttaccaaatc
aatgcaacggacttctatgacggcgtttactggatcgatgaccgggccggaaaacctctg
gttcgccactacccacgtcgccaagcggtgacacaagcggcacaatgggtgaccgatgcg
cgtgaaacatctgtcacggatattgaagaccacgagctggctcaacgcgtgcagtgggcc
caacccgacgaagatatgacgcagagcagtgaggttcacttgccaagtcacctctcggcc
tcagcatttataagtttggtagacgacccgcacaccgtagcgaagtcactgaaacgtccg
atgccacgtcgaccgatcaaagcagcccgaacaggtacgctcgtccaccaatggattgag
gaacatttcgccagtcagcgttctggcatcacgggcatgctcgacttcgaggacccggtc
gaggatgccgaccaggtctgggacgaacaaaccggtgtgacgaccctgcgagagaacttc
ctgaacaccagatgggcgcaacgctcaccagcgttcatcgaagccggggtggaaacgaca
gtcgggtcggtgaccattcgtggccgtattgacgctgtttttcggaacgggggagaccac
ccggatcaggaattcgaccccaccgcgcagtgggagctcgttgactggaaaacgggtatg
gtgccgtcgaccccagacgacttggaacataaaggacttcagctggcgctgtaccgtttg
gcctggtcacggctacatgatattcccctggcgaatatctcgggacgttttgtgtacctt
gcacatggcgaagaacgaactccggtcaaccttgctgacgccgagcaactggaagcgttg
ctggctcaagcgctggaagccaccgaaccccacggagcagattga

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