Auritidibacter ignavus: QDX25_02500
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Entry
QDX25_02500 CDS
T09017
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aig
Auritidibacter ignavus
Pathway
aig03030
DNA replication
aig03410
Base excision repair
aig03420
Nucleotide excision repair
aig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QDX25_02500 (polA)
03410 Base excision repair
QDX25_02500 (polA)
03420 Nucleotide excision repair
QDX25_02500 (polA)
03440 Homologous recombination
QDX25_02500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aig03032
]
QDX25_02500 (polA)
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_02500 (polA)
Enzymes [BR:
aig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QDX25_02500 (polA)
DNA replication proteins [BR:
aig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QDX25_02500 (polA)
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QDX25_02500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QDX25_02500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WGH82755
LinkDB
All DBs
Position
551197..554010
Genome browser
AA seq
937 aa
AA seq
DB search
MTSPERSQQNSRLLVIDGHSMAFRAFYALPAENFATTTGQHTNAVYGFLTMLLSMIREQQ
PTHVAVAFDVSTPTFRSEEYGEYKAGRQETPEEFSGQIDLIGEVLEALNIPAITVDGYEA
DDIVATFSAQAEQAGWTTVVVSGDRDAFQLISETTAVLYPTKGVSEIPPMTTQTVLDKYG
VRPAQYPELAALVGEKADNLPGVPGVGAGFASKWLKQYGDLQGVIDNADQIKGKKGQALR
EHLDDVIRNRKLNALVRDLDLPIQLEATALSAPDHDHINDLFDSLEFNRVRERVFDVFHE
RLGLEGSSAQASVEVTIELITQAAQLRDFLSTHGGTALGVFAQITAPEVITRRKIPAPGD
YGTVAAVSIATEDQAGVIELSGSTDTELIAEVNDFLLSGSYQKVVYDLKTLIKAGGATEV
LTQSLNEDQDLHHIAEVVDDILLCGYVLQPDRRGFDLPALAQTYLNTTLEVPKTAPVNKQ
GELDLGETHEPALSQEMQTYLGQAGSMLIRLHEVMYPELIARDAHQLVTEVEIPLSRVLA
VMEETGVAVNTNKLHELLEVFSDQAQAAEDRARESIDGDPVNLGSPKQLQTVLFDRLNLP
KTRKTKTGHSTDAESLNDLLDKTDHPFLHNLMAYRDATKLKQTVQGLLDSVATDQRIHTT
YSQTAAATGRLSSLNPNLQNIPVRTETGRRIRDIFQAGTIPGCDEPTTLLTADYSQIEMR
IMAHLSEDAGLIQAYQEGEDLHRFVGSQVFDVRPAEVTTAMRDKVKAMSYGLAYGLSSFG
LSKQLRIPVDEARELMSSYFQRFGSVQKYLRGVVKEARNDGYTSTMMGRRRYLPDLQSDN
RQLRDMAERAALNAPIQGSAADLIKVAMLGVARRLREESMNTRMLLQVHDELILEVPESE
RERAETILVEEMSQAAELSVPLDVQVGRGRTWQQAAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtccccggagcgctcccagcagaactcccggctgttggtcatcgatggccactcc
atggcgtttcgggccttctacgcgctaccggcggagaacttcgccacaaccaccgggcaa
cacaccaatgcggtgtatggattcttgaccatgttgctgtcgatgattcgcgagcaacaa
cccacccacgtcgcggtcgccttcgacgtctccaccccgaccttccgttcggaagaatac
ggtgaatacaaggccggtcggcaagaaactcccgaggaattctccggccagattgatctg
atcggtgaagtcctcgaggccctgaacattccggcgatcaccgtcgacggctacgaagcc
gacgacattgtggcaaccttctcggcgcaagccgagcaagccggttggaccaccgtggtg
gtctccggcgaccgggacgccttccagctgatctcggagaccaccgcggtgttgtatccg
accaagggtgtctccgaaatcccaccgatgaccacccaaacggtgctggataaatacggg
gttaggccagcgcagtaccccgaactggcggccctagtcggggaaaaagccgataatctc
cccggtgtccccggtgttggcgccggtttcgcttccaaatggttgaaacaatacggagat
ctgcagggcgtgatcgataacgctgaccagatcaaggggaaaaaaggccaagcgctacgc
gagcacctcgacgatgtgatccgtaaccgcaaactcaacgcgctggtacgcgacctagac
cttcccattcagctcgaagccaccgcgctgtctgcaccggatcacgaccacatcaacgat
ttattcgattccctggaattcaaccgcgtgcgcgaacgggttttcgatgtcttccatgaa
cgtctcggcctcgaaggctcctcagctcaggcctcggtggaggtcaccatcgagctgatc
acccaggcagcccagctgcgggattttctctccacccatggtggcactgcgctcggggtt
ttcgcccagatcaccgccccggaggtcatcacccgacgcaaaatcccggcccctggtgac
tacggcaccgtggccgcagtctctatcgccactgaagaccaggccggtgtgatcgagctt
tccgggtctactgacaccgagctgatcgccgaagtcaacgatttcttactctcgggctcc
taccaaaaagtggtctacgacctgaaaacactgatcaaagccggtggcgccaccgaggtg
ctcacgcagtccttgaacgaggaccaagacctccaccacattgccgaggtcgtcgacgac
atcctgctctgcggatacgtgctccagccggaccgtcgcggtttcgatctgccagcgcta
gcacagacgtatctgaacaccacgctcgaggtgcccaaaacagcaccggtgaataaacag
ggtgagctcgatctgggggagactcacgagccagcactgagccaggaaatgcagacctat
ctgggtcaggccgggtcgatgctgatccgactccacgaagtcatgtaccccgagctgatc
gcccgcgatgcgcatcagctggtcaccgaggtggaaattccgctctcccgagtgctggcc
gtgatggaagaaaccggggttgcggtcaataccaataagctccacgagctcctggaagtc
tttagtgatcaggctcaggccgccgaagaccgagcacgggaatccatcgacggtgacccg
gtgaacctgggctcgcccaaacagcttcaaaccgtgctcttcgaccggttgaatctaccc
aagactcgtaaaacgaaaaccgggcactccactgatgccgaatccctcaatgatctgctg
gacaagaccgatcacccctttctgcacaacctgatggcctatcgagatgccaccaaattg
aaacaaaccgtgcagggtctgctcgattcggtggctaccgatcagcgcatccacaccacc
tactctcagaccgcggcggcgacggggcgactgtcgagcctgaacccgaacctgcagaat
attccggtccgcactgaaaccggtcgacgtattcgcgacattttccaggctgggaccatt
cccggatgcgatgaacccaccacactgctgacagcggattattcgcagatcgaaatgcgc
atcatggcccacttgtccgaggatgccggattgatccaggcttatcaggagggtgaggac
ctccaccggttcgtcggctcccaggtctttgatgtccgtcccgcagaggtgaccactgcg
atgcgtgacaaggtcaaagcgatgtcctacggtctggcctacggtctgagttccttcggg
ctatccaaacagctcagaattccggttgatgaggcccgcgagctgatgagttcctacttc
cagcgcttcggctccgtgcaaaaatacctgcgtggggtggtcaaagaagcccgcaacgac
ggctatacctccacgatgatggggcgacgtcgctatctgccagacttgcagtccgataat
cgccaattgcgggatatggcagaacgcgcggcgctgaatgccccgattcagggctcggcc
gcggatctgatcaaggtcgcgatgctcggtgtcgcccggcgactccgcgaggaatcgatg
aacacgcggatgttgttgcaggtccacgacgaactgattctcgaggtcccagaatcagaa
cgggaacgggccgaaacaattctggttgaagaaatgtcgcaggccgccgagctctcggtg
cccctggatgtgcaagtcggacgcggacgcacctggcagcaagcagcccactaa
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