Auritidibacter ignavus: QDX25_02565
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Entry
QDX25_02565 CDS
T09017
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aig
Auritidibacter ignavus
Pathway
aig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QDX25_02565 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_02565 (uvrA)
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QDX25_02565 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QDX25_02565 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_21
AAA_22
AAA_25
nSTAND3
nSTAND6
DnaJ_CXXCXGXG
AAA_18
NACHT
Viral_helicase1
ATPase
NB-ARC
PRK
cobW
MeaB
SLFN-g3_helicase
NTPase_1
DUF5837
ScfRs
Motif
Other DBs
NCBI-ProteinID:
WGH82757
LinkDB
All DBs
Position
570918..573875
Genome browser
AA seq
985 aa
AA seq
DB search
MASGPHPGQTVAHHDSVEADRIIVAGAREHNLKNVSIDIPRNAFVVFTGLSGSGKSSLAF
DTIFAEGQRRYVESLSAYARMFLGRVDKPQVDFIEGLSPAVSIDQKSTSKNPRSTVGTIT
EIHDYMRLLWARIGTPHCPECGEPASQQTPQQIVDQLLELPEKTRFQILAPVVRGRKGEF
ADLFAELSQQGFSRAIVDGEQIQLAEATKLQKQYKHNIAVIVDRLVIRDGIRTRLTDSVE
TALKLAEGILVVDFVDVKAEIDPEKKNTAEWVAEDEQGRAKYRSFSEKLSCPNGHVQTID
EIEPRSFSFNSPFGACPTCTGIGSRLQVDQDLVIPDPDLSLEEGAIAPWHMGKAASQYWQ
RLMAGLADELGFSMTTPWKELPAKAKKALLHGNNYKVEVAYRNRWGRERRYTSGFEGVVD
YIKRKYAETESDHARDRYESYMRQVACPDCHGARLNPTSLSVMVGGKSIAEVSAMPMEDT
IDFMENLQLSDRDAKIADQVLKEINARLHFLIDVGLDYLNLERPAATLSGGEAQRIRLAT
QIGSGLVGVLYVLDEPSIGLHQRDNSRLIGTLLRLRDLGNTLIVVEHDEETIEAADWIVD
IGPAAGRAGGEVVHSGSLEDLKNNTRSITGDYLAHRRTIDVPATRRPIDRQRIVRVVGAR
ENNLDNVTVDFPLGTFIAVTGVSGSGKSTLVNEVLYKVMANELNNARLVPGRHKKVTGLD
QLDKVVHVDQSPIGRTPRSNPATYTGVFDAIRKLFADTPEAKVRGYQPGRFSFNIKGGRC
EACSGDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKNIAEVLDMPIAEAAEFF
SAYGKISRYLNTLVDVGLGYVKLGQPATTLSGGEAQRVKLATELQKRTAGRAVYVLDEPT
TGLHFEDIRKLLLVLTRLVNKGNTVITIEHNLDVVKSADWIIDMGPEGGSGGGQVVATGT
PEQVATVQGSYTGQYLAPLLHGAQD
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
ctggcctcgggaccccacccgggacagaccgtcgctcaccatgattcggtcgaagccgac
cggatcattgtggccggcgcccgtgagcacaatctgaaaaatgtcagtatcgatattcct
cgcaatgctttcgtggtgtttaccggactatctggctccggtaagtcgtccttggcgttt
gacaccatcttcgccgagggccaacgccggtacgtggaatcactgtctgcctatgcccgg
atgttcttgggccgtgtcgataagccccaggttgattttattgagggactctccccggcg
gtatcgatcgaccagaaatccacttcgaagaaccctcggtccaccgtgggcacgatcacc
gaaatccacgactatatgcgcctgctgtgggcccggatcgggactccgcactgcccggag
tgcggtgagcctgcctcccagcagaccccgcaacaaatcgtcgatcagttgctggaatta
ccggagaaaacccgcttccagatcctggccccggtggtgcgcggccgcaagggcgaattc
gccgacctctttgccgagctctcccagcaaggcttctcccgcgccatcgtggacggagag
cagatccagctggccgaggccaccaagctgcagaaacagtacaagcacaatatcgccgtg
atcgttgaccggctggtgatccgcgacggtatccgcacccgactgaccgactcggtcgaa
accgccctgaaacttgccgaggggatcttggtcgtcgatttcgtcgacgtcaaagccgag
attgacccggagaaaaagaacaccgccgaatgggtcgccgaagatgagcagggccgggcc
aaatatcggtcgttttccgaaaagctgtcctgccccaacgggcacgtgcagaccattgac
gaaatcgaaccccgctcgttctccttcaatagccccttcggcgcctgcccgacctgtacc
ggtatcggctcccggttgcaggttgatcaggacttagtgatcccagacccggatctgagc
ctggaagaaggcgcgatcgcaccctggcacatgggtaaagccgcctcccagtattggcaa
cggctgatggcaggtctggccgatgagctgggcttttcgatgaccaccccgtggaaagag
ttgcccgccaaggccaaaaaagcgctgttgcacggcaataattacaaggtcgaagtggca
taccgcaaccggtggggtcgggaacggcgttacacgtccggtttcgagggcgtggtggac
tacattaagcgcaaatacgccgaaaccgaatccgatcacgcccgtgatcggtatgagtcc
tatatgcgccaggtggcctgcccggattgccacggtgcccggctgaaccccacttcgctg
tcggtgatggttgggggaaaatcaatcgccgaggtctcggccatgcccatggaagacacc
attgacttcatggagaacttgcaactcagtgaccgggacgccaaaatcgccgaccaggtg
ctcaaagaaatcaacgcccggttgcacttcttgatcgatgttggtctggactatctgaac
ctggaacgcccggcagccactctctcgggtggtgaagcccagcgtatccggctagccacc
caaatcggatccggtctggtcggggtgctctacgtactcgacgagccctcgatcgggctc
caccagcgcgataactcccgcctgattggcacattattgcgcctgcgggatttgggcaat
accttgatcgtggtcgaacatgatgaggaaaccattgaagctgccgactggattgtcgat
attggcccggctgccggacgggccgggggagaggtggtccactccggttcgctcgaagat
ctcaaaaacaacacccgctcgatcactggcgactatttggctcatcgacgcaccatcgac
gttcccgcgacccgccgaccgattgaccgccagcggatcgtccgagtggtcggcgcccgc
gaaaataacctcgataacgtcaccgtcgacttccccttgggaactttcatcgcggtgacc
ggtgtctccggatcggggaagtccaccctggtcaatgaggtcctgtacaaggtcatggcc
aatgaactcaataacgcgcgcctggtgccgggccggcataagaaagtcacgggtctggac
cagttggacaaggtggtccacgtcgatcagtccccgatcggacgtacgcctcggtccaac
ccagctacctataccggcgtcttcgacgcgatccgtaagctcttcgctgacacccccgaa
gcaaaagtgcgtggctatcagcccggccgattctccttcaatatcaagggtggtcgctgt
gaggcctgctccggtgatggcacactaaagatcgaaatgaacttcttgccggatgtctat
gtgccctgcgaggtctgtcacggagcccggtataaccgcgaaactctcgaggtccactat
aagggcaaaaatattgccgaagtgctggatatgccgatcgctgaggccgccgagttcttc
tccgcctacggaaagatctctcgttatctgaacacactggtcgatgtcggccttggctac
gtgaagctaggccaaccggcgaccacactatccggtggtgaagctcagcgggtcaaactc
gccaccgaactgcaaaaacgcacggcagggcgggcggtctatgtgcttgatgaaccgacc
actggcctgcactttgaagatatccgtaagctgttgttggtgttgactcggctggttaat
aagggcaataccgtgatcaccatcgaacacaacctggacgtggtgaaatcagccgactgg
attatcgatatgggacccgaaggcggttccggtggtggccaggtcgtcgccaccggaacc
cccgaacaggtggccaccgtccaggggtcctataccggtcaatacctggccccgctactc
catggcgcacaggactaa
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