Auritidibacter ignavus: QDX25_03320
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Entry
QDX25_03320 CDS
T09017
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aig
Auritidibacter ignavus
Pathway
aig03030
DNA replication
aig03430
Mismatch repair
aig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QDX25_03320 (holA)
03430 Mismatch repair
QDX25_03320 (holA)
03440 Homologous recombination
QDX25_03320 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aig03032
]
QDX25_03320 (holA)
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_03320 (holA)
Enzymes [BR:
aig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QDX25_03320 (holA)
DNA replication proteins [BR:
aig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QDX25_03320 (holA)
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QDX25_03320 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WGH82208
LinkDB
All DBs
Position
complement(739041..740033)
Genome browser
AA seq
330 aa
AA seq
DB search
MPAGTKRASTASWRTVEPAPIMLLRGPEDFIAMRVTDRVRATVREQEPDLETHRLSAADY
EPGQLTMLASPSLFSQAKLIQVDDLQKMNDAFLAEALQYVKDPADDVTLLMRHTGGNRGK
KLLDVLKKSGTVVECESIKSDRDKLEFVTQEFKVHRKKVASEAIRALVDAVGSDMGELAS
AVDQLISDVEGPVTEQVVDRYYGGRVQATAFKVADATLDGQIAQAVGLLRHSLLTGVSPV
AITAALAMKARQIARIIDARIGQGQIAQTLGVAPWQAKRIAATTRRWTAPGIAQAMELIA
QADAEAKGLARDPDYSVERMIIRVAQGTRR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctggtaccaaacgcgcctccaccgcctcctggcggaccgttgaacccgcaccg
atcatgttgttgcgtggtccggaagatttcatcgcgatgcgggtgactgatcgtgtgcgg
gctaccgtacgggagcaagaaccagatctggaaacccaccgactctccgcagctgactac
gagccgggccaactgaccatgttggcgagtccttcgctgtttagccaagctaaattgatc
caggtcgatgacctacagaaaatgaacgatgcgttcctcgccgaggcgttgcaatacgtc
aaggacccggccgacgatgtcactttgctgatgcgacataccgggggtaaccggggtaag
aaacttctcgacgtcctcaagaagtcgggcaccgtggtcgagtgcgaaagcatcaagtct
gaccgcgacaagttggagtttgtcacgcaagagttcaaagtccaccgtaaaaaggtcgcc
tccgaagctatccgcgctttggtggacgcggtcggttccgatatgggtgaattggcctca
gctgtggaccagctgatctcagacgtggaaggccccgtgaccgagcaggtcgtcgaccgc
tactatggcgggcgtgtgcaggccaccgcattcaaagtcgccgatgccaccttagatggc
cagatcgctcaagccgtcggactgctccggcattccctactgaccggcgtctcgcccgtg
gccattaccgcagcgctggcaatgaaggcccgccaaatcgccagaatcattgatgccaga
attgggcaaggacaaattgcacagaccctcggtgttgcgccttggcaggccaagcgaatt
gcggcaaccacccgccgctggaccgcgccggggatcgctcaggccatggagctgattgct
caggcagatgccgaggctaaaggcctggcccgggacccggactattcagtggaacgcatg
atcatccgggtggcacagggcaccagacgctag
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