Auritidibacter ignavus: QDX25_04070
Help
Entry
QDX25_04070 CDS
T09017
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aig
Auritidibacter ignavus
Pathway
aig03030
DNA replication
aig03430
Mismatch repair
aig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QDX25_04070 (dnaE)
03430 Mismatch repair
QDX25_04070 (dnaE)
03440 Homologous recombination
QDX25_04070 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aig03032
]
QDX25_04070 (dnaE)
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_04070 (dnaE)
Enzymes [BR:
aig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QDX25_04070 (dnaE)
DNA replication proteins [BR:
aig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QDX25_04070 (dnaE)
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QDX25_04070 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
AfaD
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WGH82338
LinkDB
All DBs
Position
complement(914535..918119)
Genome browser
AA seq
1194 aa
AA seq
DB search
MTSTASEDRGFVHLHTHTEYSMLDGAAKLDELFAEANRLGMESMAITDHGYLFGAFDFWS
KAKNAGIKPIIGLEAYLAPGQQSRHDKTRVRWGEQGQRGDDVSGGGAYTHMTMLSKNNTG
MHNLFKAASIASLDSVYSKWPRIDRDLLSQYSEGIIATTGCPSGEVQTRLRLGQKQEALE
AAAEFRDIFGKENFYLEIMQHGLDIERRVFTDLLEIGKKLNLPMVATNDLHYTHEHDAGH
HEALLALQSGSRLDEPTYDQGGSRFAFSGNEYYLKSSREMRTLFKEFPEACDNTLLIAEQ
CDVSFNTDANYMPAFPTPEGEDETSWLIKEVNKGLRNRYPHGVPDYAQKQADYELDVIIS
MGFPGYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITELDPIKHGLIFERFLNP
DRVSMPDFDVDFDDRRRPEVIDYVTEKYGDERVAMIVTYGTIKTKMALKDSARVKGKPFS
MGEQLTKALPPAVMAKDIPLKDIENPEAPRYNEAAEFRELLQTDPEMVDVFETAKGLEGL
KRQWGVHAAGVIMSSAPVIDVVPIMRRLQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTI
ISDALDNIEANQGTPLDLEALTLDDTESYELLARGETLGVFQLDGGPMRQLLKMMRPDNF
EDISATIALYRPGPMGANSHINYALRKNNQQEITAIHPELAEPLADILDTTYGLIVYQEQ
VMAIAQKVAGYSLGQADILRRAMGKKKKAELDRQYVDFHQGMLDRGYSEEAVTALWDILL
PFSDYAFNKAHSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGSDKDKMAMYLNECRRMGI
TVLPPDVNESALQFTPVGNDIRFGLGAVRNVGDNVVHGIVNAREEQGQFTSFQDFFKKVP
QVVCNKRTIESLIKAGGFDSMRHPRRALLAVHEEAVDASVVQKRQEANNQFDFFSLLDDS
DTSAADVGLGISVPDVPEWDRKTKLSFERGMLGLYVSDHPLQGLESVLSQYADHTITQIL
DEDGPADGAQVTIAGLINTLERRIAKNSGNAYARTEVEDLNGSMDVMFFGQVYAPIATVL
AEDLIVSVKGRVQRRDDGSVSLSAQEMTLIDAQEASVGHGGPVNLSIPHFKATESLMREL
GETLKNHSGSTDVRVKLMGNLGIDVMQLGPDFRVSPNPALFGDLKVLLGASCLD
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaactgcctctgaggatcgaggtttcgttcacctgcacacccacaccgagtac
tcgatgttggatggagcggcgaaactggacgagttattcgccgaggccaacaggttgggt
atggaatccatggccattaccgaccacgggtatctcttcggcgccttcgacttctggtcc
aaagccaaaaacgccggcatcaaacccattatcgggttagaagcgtatttggcccccggc
cagcagtcccgccacgacaaaacgagggtgcggtggggcgaacagggccagcgtggtgac
gatgtttcgggcggtggcgcctatacgcacatgaccatgttgtcgaagaacaacaccggc
atgcacaacttattcaaagctgcctcgatcgcatcactggattcggtctactctaaatgg
ccgcgcatcgaccgagatctgttgagccaatactcggagggcattattgccaccaccggg
tgcccgtccggggaagtgcagactcgattgcgactgggccagaaacaagaggcgctggag
gccgctgcggaattccgcgatatcttcggtaaggagaatttctacctggaaatcatgcaa
cacggcctcgatattgagcgccgggtgtttaccgatctgcttgagatcggcaaaaaactc
aatctacccatggtcgctacgaacgacctgcattacacccacgaacacgacgccggtcac
catgaagccctcttagccttgcaatcggggtcccgactggatgagcccacctacgatcag
ggcggttcccgtttcgccttttcaggcaacgagtattatttgaagtcatcgcgtgaaatg
cgcactctgttcaaagagttccccgaagcctgcgataacaccttgctcattgccgaacag
tgcgatgtcagcttcaacaccgatgccaactacatgccggccttccccacgcccgagggg
gaagacgagaccagctggttgatcaaagaggtcaataaaggcctgcgcaatcgttatccc
catggagtccccgactacgcccagaagcaagccgactatgagcttgacgtgatcatctcc
atgggtttccccggttacttcctggtcgtggcagacttcatcaactgggcaaagaataac
ggcatccgcgtcggcccaggccgtgggtctggtgcaggctcgatggtcgcttacgcgatg
cggattaccgagctggatcccatcaagcacgggctgatcttcgagcggttcttgaacccg
gaccgtgtctcgatgcctgacttcgacgtcgacttcgacgatcgccgtcgtcctgaggtt
attgactatgtgaccgaaaaatacggggacgagcgggtggcaatgattgtcacctacggc
accatcaagaccaagatggcgttgaaagactctgcccgtgtgaagggcaaaccgttctcg
atgggggagcagctcaccaaagcactcccaccggcagtgatggctaaggacattccgctc
aaagacattgagaaccccgaggcgcctcggtacaacgaggctgcagagttccgcgaattg
ctccagaccgacccggagatggtagatgtcttcgaaacggcgaagggcctagaaggtttg
aagcggcagtggggtgtgcacgccgccggggtgatcatgtcctcggcgccggtgattgat
gtagtccccattatgcgccgactccaagacggccaggtcatcacccagtttgattacccc
acctgtgaaggcctggggctgatcaaaatggacttcttgggtttgcgcaacctaaccatc
atctcggatgccctggacaacattgaggccaaccagggaaccccactggatctggaagct
ctcaccttagacgacaccgaatcctatgagttgctggcgcgtggagaaaccctcggagtc
ttccagctcgacggtggccctatgcgccagctactaaagatgatgcgcccggataacttc
gaagatatttccgcgaccatcgcgctatatcgcccgggcccgatgggtgccaactcgcac
atcaactacgcgttgcgcaagaacaaccaacaagagattaccgcgatccacccggagcta
gcagaaccactggcagacattttggacaccacctacggtctgattgtttaccaggagcag
gtgatggccatcgcccagaaggtcgccggctactcgctgggtcaagcggatattctccgt
cgcgcaatgggtaagaaaaagaaagccgagctggaccgacagtacgtggacttccaccaa
ggcatgctggaccgtggctattcggaagaggcggtgactgcgctctgggacattctgctt
ccattctctgactacgcgttcaataaggcccactcggctgcctacggactcgtctcgtat
tggaccgcgtacctgaaggctcactatccggctgaatacatggcagccctgttgacctcg
gtgggctcggataaagacaagatggcaatgtatctcaacgagtgccgtcgcatgggtatc
acagtgcttccgcccgacgtcaatgaatcagctttgcagttcacaccggttggtaacgat
attcgtttcggcctgggggcggtgcgcaacgtgggcgacaatgtcgtgcacgggatcgtg
aacgcccgtgaagagcaaggtcagttcaccagcttccaggacttctttaaaaaggtcccg
caggtggtgtgcaataagcgcaccatcgaatccttgattaaagccgggggcttcgattcg
atgcgtcacccccggcgcgcgttgttggcggtgcatgaagaagccgtagacgcctcggtg
gtgcagaaacggcaagaggccaataaccaattcgacttcttctccctgcttgacgacagc
gacacctcagccgctgacgtgggcctgggtatctctgtgccggacgtgccggaatgggat
cgtaagaccaagctcagctttgaacgtggcatgctgggactctacgtctcggatcacccg
ttgcaaggcctagaatcggtgctgtcgcaatacgctgaccacaccatcacccagatcctg
gatgaagatggccctgctgacggggcccaagtcaccattgctggcctgatcaacaccctg
gagcgcaggatcgcgaagaactcgggtaatgcctatgcccgtaccgaagtcgaagatctc
aacgggtcgatggatgtgatgtttttcggacaggtctatgcaccgattgccaccgtactg
gccgaagatctcatcgtctcggtcaaaggcagagtccaacgacgtgacgacgggtcggtc
tcgctctcggcccaagagatgacgctgatcgacgcacaggaagccagtgtaggccatggg
ggaccggtgaacctcagcatcccgcatttcaaggccaccgaaagtctgatgcgggagctt
ggcgaaaccctgaagaaccattccgggtcgaccgacgtgcgggtgaaactgatgggcaat
ctcggcattgacgtgatgcagcttggcccagatttccgcgtgtcacctaatccagcccta
tttggtgacctcaaggtgctgctgggagcctcctgtctggactaa
DBGET
integrated database retrieval system
