Auritidibacter ignavus: QDX25_04795
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Entry
QDX25_04795 CDS
T09017
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aig
Auritidibacter ignavus
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aig03016
]
QDX25_04795 (truB)
Enzymes [BR:
aig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QDX25_04795 (truB)
Transfer RNA biogenesis [BR:
aig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QDX25_04795 (truB)
Prokaryotic type
QDX25_04795 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WGH82470
LinkDB
All DBs
Position
complement(1080623..1081585)
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AA seq
320 aa
AA seq
DB search
MSFSTSASNTSQAPGRSVSGLVLVDKPTGWTSHDVVAKLRKLAGTRKVGHAGTLDPMATG
LLVVGFNKATRLLTHITGTNKTYAATIRLGVNTTTDDADGEVIHRRYANAVTRDRLEVAI
AELTGEIDQIPSAVSAIKVGGKRAYQRVRDGEKIELPARRVTVSRFKVTGVHRLDKGKIL
DIEVAIDCSSGTYIRALARDLGESLNTGGHLIALRRTRVGPFTIDKAHTIEQLGSRFDYC
ELSQACSELFPVREVCDHEAEALSFGRLVSPNDDDRCYAARHGGDTVIALIENARTKTGY
GAKPQVVFVTDYRIHTEGEA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttctccacctccgcttccaacacctcccaggccccgggacgaagcgtctcgggt
ctggtgctggtggacaaaccgaccggctggacctctcatgatgtggtggccaagctacgc
aaactcgctgggacgcggaaagtcggtcacgcaggaaccttggacccgatggctacaggc
ttactggtcgtggggttcaataaagccacccgccttttgacccacatcaccggtacgaac
aagacctatgccgcaaccatccggctcggtgtcaataccacgaccgatgatgctgacggt
gaggtcattcatcgcagatacgccaacgcggtcactcgagaccgtcttgaggtcgccatc
gcagaactgacgggggaaatcgatcagatcccttcggcagtgtctgccatcaaggttggt
ggcaaacgagcctatcagcgcgtgcgtgacggtgaaaagatcgagctaccggcacgtcgg
gtcaccgtatctcggttcaaggtcaccggagttcatcgtctcgacaagggaaagattctt
gatatcgaggtcgctatagattgctcttcgggtacctatatccgggctctcgccagggac
ttgggcgagtctttgaacactggcgggcacctgatcgcgctgcgccgcacccgggtggga
ccctttactatcgataaggcccacaccatagaacagctgggaagtcggtttgactactgt
gagctatcacaggcctgttccgagctgttcccggtccgtgaagtctgcgaccacgaggcg
gaagcgctgagtttcgggcgactggttagccccaatgacgacgaccgatgctacgcagct
cgccatggtggcgacaccgtgatcgcgctgatcgaaaacgctcgtaccaaaaccggttac
ggggccaagcctcaggtagtgttcgtcaccgattatcgcatccacacagaaggtgaggcc
tga
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