Auritidibacter ignavus: QDX25_06565
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Entry
QDX25_06565 CDS
T09017
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aig
Auritidibacter ignavus
Pathway
aig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QDX25_06565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_06565
Enzymes [BR:
aig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
QDX25_06565
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QDX25_06565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF6134
Motif
Other DBs
NCBI-ProteinID:
WGH82797
LinkDB
All DBs
Position
complement(1436588..1437400)
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AA seq
270 aa
AA seq
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MATVNVNGIRAAYRREMKSWFDGRGVDILALQEVRANGEILRELLGEITGDEWDVTHIHD
AEAEAKGRAGVAVASRWEFDQTRTGIGDSYFDNAGRWVEVDLTLPSGQPVTVVSAYVHSG
EVDTPKQDDKYRFLDQMLVRMPELATEHRLAVVTGDLNVGHTELDIKNWKGNVKNSGFLP
EERAYFDRFFDPDQLNWVDVGRSLAGDIPGPYTWWSYRGKAFDNDAGWRIDYQIATPDLA
DKAITAVVDRAPSYDTRFSDHSPLVVDYQF
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtggctacggtcaacgtcaacggcattcgtgccgcctaccggcgagagatgaagtcctgg
ttcgatgggcgcggagtagacattctcgcgttgcaagaagtccgggccaacggagagatc
ctgcgcgagttgctcggcgagatcaccggcgacgaatgggatgtgacccacattcacgac
gctgaggcagaagctaagggccgtgccggggtggccgtcgcctcccgttgggagtttgac
cagacccgcaccggcattggggatagctacttcgacaacgctgggcgctgggtggaagtc
gatctcacgcttccgtcaggtcaaccggtcaccgtggtgtccgcctatgtgcactccggt
gaagtcgacaccccgaaacaagatgataaataccggttcctcgaccaaatgttggtccgc
atgcccgaattggctaccgagcatcgcttggctgtggtcaccggtgacctcaacgtcgga
cacaccgaactcgatatcaagaactggaaaggcaacgtgaagaactctggatttttgccc
gaagaacgtgcctatttcgaccggttctttgacccggaccagctgaactgggttgacgtg
gggcgtagcctggccggagatatccccggcccctatacctggtggtcctaccggggcaag
gccttcgataacgacgcggggtggcggatcgactaccagatcgccacacccgatctggcc
gacaaagccatcactgccgtggtggatcgagcccccagttatgacacccggttctccgac
cactcgccgctggtggtggactaccagttctaa
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