Auritidibacter ignavus: QDX25_06755
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Entry
QDX25_06755 CDS
T09017
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aig
Auritidibacter ignavus
Pathway
aig03420
Nucleotide excision repair
aig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QDX25_06755 (pcrA)
03430 Mismatch repair
QDX25_06755 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_06755 (pcrA)
Enzymes [BR:
aig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QDX25_06755 (pcrA)
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QDX25_06755 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QDX25_06755 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
UPF0149
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
WGH80529
LinkDB
All DBs
Position
complement(1481604..1484060)
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AA seq
818 aa
AA seq
DB search
MASMITPSSSDPDTLIADLNDQQQAAVAHRGGPLLIVAGAGSGKTKVLTHRIAHLLATGE
ARPWEFLAITFTNKAAREMRERIEGLIGPDAQKMRISTFHSSALRILRAEASTVGLKSNF
SIYDAADSLRLISQLVKVADLDPKRVKPKSIQHKISSLKNDLVDADEFASNNSGDPFQQA
VAEVYTEYTARLRQANAMDFDDLISTTVNMFRAFPAVLDNYRRRFRYVLVDEYQDTNHAQ
YQLVRLLTGEPGDPSGCETSGGQLTVVGDSDQSIYAFRGADISNIIEFERDYPDATVINL
EQNYRSTQNILDAANAVISHNPSREAKRLWTDAGTGAALIGYAGENESDEAGWVADKIDE
LIDNDEAIPEDIAVFYRTNAQSRALEERLISAGIPYRVIGGTRFYDRKEIKDALAYLRVI
DNPDDDVNLRRILNEPKRGIGDRSEAALAVLQDRERISFFDALHRADQAPGIGSRAVKKV
QEFAQLLDDLQQLATTESPARVLEAVLEQTGMLHALRSSEDLQDESRADNLGELVAVVRD
FEKTHPDGDLSQFLEQVALVADTDQLPTPVETDTEGQDLAEQWGQVTLMTLHTAKGLEFP
VVFLTGMEHGVFPHARSMGDTQELAEERRLAYVGLTRAEKRLYLSRSESRSLWGQHQFNP
PSQFLTEIPDALIEWEREGRLNGVDTRGSWNDIGAGLGFGAPGSRYPKRFTGSHWGASTS
RSHYGKPGQSSGSRAGATGITEAQERAEVVRGEKPTRVVPDHEVISLSPGDHVKHKSFGT
GVVTAISGSGDKTVATVAFSGSEKRLLLRYAPVEKISF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatgatcaccccctcgtcttcggatcctgacacgctgatcgctgacctgaac
gaccaacagcaggccgcagtcgctcaccgcgggggaccgttgctgatcgtcgccggagca
ggctcgggtaaaaccaaggtgctcacccaccgcattgctcatttactggccaccggggaa
gctcgtccctgggagttcttggccattaccttcaccaataaggccgcccgagaaatgcgc
gaacgcatcgaagggctgatcggtcctgatgcccaaaaaatgcggatctcgacctttcac
tcctcagcgctacgcatcctaagagctgaagctagcaccgtgggattgaaatccaatttc
tccatctatgatgctgctgattccttgcggttgataagccagcttgtcaaggtggcggac
ctggatcccaaacgggtgaaacctaaatcgattcagcacaagatttcctcgctgaagaat
gatttggtggatgccgacgagttcgcctcgaacaacagcggggaccctttccagcaggcg
gtggccgaggtctacaccgaatacaccgcgcgcttgcgtcaggcgaatgcgatggatttc
gacgacctgatctccaccactgtcaatatgttccgcgctttccccgctgtgctcgataac
taccgtcgccggttccgttacgtgctggtcgatgagtaccaagacaccaaccatgcccag
tatcagctggtccgattgctcaccggggaacccggagacccctccgggtgtgagaccagt
ggggggcaactgactgtcgtcggggactccgaccagtcgatttatgccttccgcggtgcc
gatatcagcaacattatcgagtttgagcgggattaccctgatgccaccgtgatcaatctg
gagcagaactaccgttccacccagaacattctcgacgccgctaacgcggtgatctcgcat
aatccctcccgagaggccaaacggttgtggaccgatgctgggaccggggcagcactgatc
ggttacgcgggcgagaacgaatcggatgaagccggctgggtggccgataagatcgatgag
ctgatcgacaatgatgaggcgatccccgaagacatagcggtcttctaccgcacgaacgcc
cagtcccgtgcgctggaagaacgcctcatctccgcggggatcccttaccgggtgatcgga
ggaacccgattctatgatcgcaaagaaatcaaagatgccctggcgtatttgcgcgtgatc
gataatcccgatgacgacgtgaaccttcgccggattctcaacgagcccaaacgcggtatt
ggtgaccgctccgaagcggccttggcggtactacaagaccgagaacgcatcagtttcttt
gacgcactccaccgcgccgatcaagcacccgggattgggtctcgagccgtgaagaaagtc
caggagtttgcccagttattggacgacctgcaacagctggccacgaccgaatccccggcc
agggtgctcgaagctgtattggaacaaactgggatgttacacgcgctacgctcctcagaa
gacctgcaggacgaatcccgggccgataacctcggagagttggtggcggtggtgcgggac
ttcgagaaaactcaccccgacggagatctgagccagttcttggaacaagtcgccctggtg
gccgataccgatcaactgcccacccctgtcgaaaccgacactgagggtcaggacttggct
gagcagtggggccaagtaaccttgatgaccttgcataccgctaaaggtttggagttcccg
gtggtatttttgaccggaatggaacacggcgtcttcccacacgcccggtcgatgggggac
actcaagagctggccgaagagcgccgactggcctatgtggggctgacccgggccgaaaag
cgactgtacctgtcccggtccgaatcccgttcgctatggggtcagcatcagttcaacccg
cccagccaattcctcaccgagattcccgacgccctcatcgaatgggaacgagaagggcgc
ttgaacggcgtcgacacgcgtgggtcctggaacgatatcggtgcggggctaggatttggc
gcccccggatctcggtatccaaaacggttcactggctcccattggggcgcttcaacctca
cgcagccactacggcaagcccggccagagttctgggtcccgagctggggctaccgggatc
accgaggcgcaagaacgcgccgaggtggttcgaggcgaaaaaccgacccgagtggtgccc
gaccacgaggtcatcagcctcagccccggcgaccacgtcaaacacaaaagcttcggtact
ggggtggtcacagccatctctggcagtggagacaagaccgttgccacggtggcgttctcc
ggttcggagaaacggctgttgctacgctacgccccagtcgaaaaaatctccttctaa
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