Auritidibacter ignavus: QDX25_12425
Help
Entry
QDX25_12425 CDS
T09017
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aig
Auritidibacter ignavus
Pathway
aig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QDX25_12425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aig03021
]
QDX25_12425
03400 DNA repair and recombination proteins [BR:
aig03400
]
QDX25_12425
Enzymes [BR:
aig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QDX25_12425
Transcription machinery [BR:
aig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QDX25_12425
DNA repair and recombination proteins [BR:
aig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QDX25_12425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DUF6327
Motif
Other DBs
NCBI-ProteinID:
WGH81566
LinkDB
All DBs
Position
2724527..2725555
Genome browser
AA seq
342 aa
AA seq
DB search
MLIAQRPTLTEEPVSTQRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFSTVNGVNEDVTEIILNIKQLSVSSENDEPVVAYLRKQGPGEVTAADITAPAGVEIHN
PELHIATLNEKGKFDMELTIERGRGYVTATQNKTPDAEIGRIPVDSIYSPVLKVTFKVEA
TRVEQRTDFDKLVLDVETKESIAPRDALASAGSTLVELFGLARELNVAAEGIEVGPSPAD
DTVAADMALPIEELEMTVRSYNCLKREGIHTVGELVARSETDLMDIRNFGAKSIDEVKEK
LAELGLSLKDSGPASFDPLATDSQEYNGGEEYNGDFQSYDQY
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgttgactgaagaacccgtatcaactcaacgctcgcgg
ttcgttattgaacccttggagcctggttttggttatacactgggtaactcgctacggcgg
accctgctgtcatccatacccggtgcgtccgtgaccagcatccgcatcgatggcgtgctt
cacgagttttctaccgtcaacggtgtgaacgaagacgtcaccgaaattatcctcaacatc
aagcagctctcggtttcctcggaaaacgatgagccggtcgtggcttacctgcgcaagcag
ggtcccggcgaggtaactgccgctgatatcactgcgccggcaggcgttgagatccacaac
cccgaactgcatatcgcgaccctgaatgagaaggggaagttcgatatggagctgaccatt
gagcgcggtcgtggctacgttaccgctactcagaacaagaccccggacgctgaaatcgga
cgaattccagtcgactccatctactctccggtcctgaaggtcaccttcaaagtcgaagcc
acgcgtgttgagcagcgcaccgactttgacaagttggtactggatgtggagaccaaggaa
tccattgctccgcgcgacgcgctggcttcggccggttccacgctggtggagctgttcggt
ttggcccgtgagctcaacgttgccgccgaaggtattgaggttggcccttcgccggccgat
gataccgtcgctgccgatatggcccttcccatcgaggagttggagatgaccgtgcggtct
tacaactgcctgaagcgtgaagggatccataccgtcggtgagctggtggctcgttctgag
accgacctgatggatatccggaacttcggtgcgaagtccattgacgaagtgaaagagaag
cttgctgagctgggcctgtccttgaaggactctggaccggcaagcttcgatcctctggct
accgactcccaggagtacaacggcggcgaagagtacaacggtgacttccagtcctacgac
cagtactaa
DBGET
integrated database retrieval system
